Skip to main content

Python module of the Smoldyn simulator

Project description

C/C++ CI PyPI version Documentation Status

Smoldyn

Smoldyn is a particle-based biochemical simulator for modeling molecular diffusion, surface interactions, and chemical reactions.

The Smoldyn webpage is at http://www.smoldyn.org. Go there to learn about Smoldyn, download the latest release, etc. This repository is here so that developers can collaborate on the code. This is the official Smoldyn repository, run by the main Smoldyn author, Steve Andrews. (It was called Smoldyn-official for a while, but got renamed to just Smoldyn.)

I welcome new contributions to the code. However, I also want to maintain Smoldyn's current design philosophy, so please contact me before writing new code so that we can discuss how additions can be made most useful. I am at steven.s.andrews@gmail.com.

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distributions

smoldyn-2.65.dev20210428-cp39-cp39-win_amd64.whl (820.7 kB view details)

Uploaded CPython 3.9 Windows x86-64

smoldyn-2.65.dev20210428-cp39-cp39-manylinux2010_x86_64.whl (1.7 MB view details)

Uploaded CPython 3.9 manylinux: glibc 2.12+ x86-64

smoldyn-2.65.dev20210428-cp38-cp38-win_amd64.whl (820.4 kB view details)

Uploaded CPython 3.8 Windows x86-64

smoldyn-2.65.dev20210428-cp38-cp38-manylinux2010_x86_64.whl (2.5 MB view details)

Uploaded CPython 3.8 manylinux: glibc 2.12+ x86-64

smoldyn-2.65.dev20210428-cp37-cp37m-win_amd64.whl (819.2 kB view details)

Uploaded CPython 3.7m Windows x86-64

smoldyn-2.65.dev20210428-cp37-cp37m-manylinux2010_x86_64.whl (3.3 MB view details)

Uploaded CPython 3.7m manylinux: glibc 2.12+ x86-64

File details

Details for the file smoldyn-2.65.dev20210428-cp39-cp39-win_amd64.whl.

File metadata

  • Download URL: smoldyn-2.65.dev20210428-cp39-cp39-win_amd64.whl
  • Upload date:
  • Size: 820.7 kB
  • Tags: CPython 3.9, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.9.4

File hashes

Hashes for smoldyn-2.65.dev20210428-cp39-cp39-win_amd64.whl
Algorithm Hash digest
SHA256 f4c9e4e80d392500bc04c63f8213c634b84eb021a00588b8da132f6cea69622b
MD5 21b2b2ee93d3ac54bdda600bf3c55fb3
BLAKE2b-256 933cab8def152b8bb0b593eabd791007d446b5155c26fdd0771d7310a52d10d3

See more details on using hashes here.

File details

Details for the file smoldyn-2.65.dev20210428-cp39-cp39-manylinux2010_x86_64.whl.

File metadata

  • Download URL: smoldyn-2.65.dev20210428-cp39-cp39-manylinux2010_x86_64.whl
  • Upload date:
  • Size: 1.7 MB
  • Tags: CPython 3.9, manylinux: glibc 2.12+ x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.8.9

File hashes

Hashes for smoldyn-2.65.dev20210428-cp39-cp39-manylinux2010_x86_64.whl
Algorithm Hash digest
SHA256 1b95a9ed06f453d72f0a5142a64e3e2263189433bb67fb09c5612886add46b47
MD5 cc67e8269a2aef2e751284318446768b
BLAKE2b-256 a554cca66e10fb79edf7b0cf7440c27fd9797fa0a4b512b88abe3e5519098401

See more details on using hashes here.

File details

Details for the file smoldyn-2.65.dev20210428-cp38-cp38-win_amd64.whl.

File metadata

  • Download URL: smoldyn-2.65.dev20210428-cp38-cp38-win_amd64.whl
  • Upload date:
  • Size: 820.4 kB
  • Tags: CPython 3.8, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.8.9

File hashes

Hashes for smoldyn-2.65.dev20210428-cp38-cp38-win_amd64.whl
Algorithm Hash digest
SHA256 6607de27c95c6e3d4f9d0534bad0a9b68333f9de92529025298ed63dcbfe5c41
MD5 1d6c0dd28a796562a6dda0d30341197a
BLAKE2b-256 ab35d9588872e9fd171f241da94db221bb72d2c015d8636fa9dadf8d66c05608

See more details on using hashes here.

File details

Details for the file smoldyn-2.65.dev20210428-cp38-cp38-manylinux2010_x86_64.whl.

File metadata

  • Download URL: smoldyn-2.65.dev20210428-cp38-cp38-manylinux2010_x86_64.whl
  • Upload date:
  • Size: 2.5 MB
  • Tags: CPython 3.8, manylinux: glibc 2.12+ x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.8.9

File hashes

Hashes for smoldyn-2.65.dev20210428-cp38-cp38-manylinux2010_x86_64.whl
Algorithm Hash digest
SHA256 209b304f3ad0b4e9af43497fe2524d6e11459dc5a23427e165dd265e439668f7
MD5 452add4102d9b0cb220b12b7828ffc05
BLAKE2b-256 13f0c17d867458ef4a1c8b490d20631541f80b87964ea400a4b5e19f7ff26b37

See more details on using hashes here.

File details

Details for the file smoldyn-2.65.dev20210428-cp37-cp37m-win_amd64.whl.

File metadata

  • Download URL: smoldyn-2.65.dev20210428-cp37-cp37m-win_amd64.whl
  • Upload date:
  • Size: 819.2 kB
  • Tags: CPython 3.7m, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.7.9

File hashes

Hashes for smoldyn-2.65.dev20210428-cp37-cp37m-win_amd64.whl
Algorithm Hash digest
SHA256 cbebe918a272ed488bbbb934cdf6300acfd27a212dfdbb3903e1dcb2fda86cc0
MD5 c319baef8e1d16c17c86e7f4fd2fbea0
BLAKE2b-256 e1df5f621fcac4b97d083b4ee1df322d1429a47dccb95bf672015c2f1ee8e85a

See more details on using hashes here.

File details

Details for the file smoldyn-2.65.dev20210428-cp37-cp37m-manylinux2010_x86_64.whl.

File metadata

  • Download URL: smoldyn-2.65.dev20210428-cp37-cp37m-manylinux2010_x86_64.whl
  • Upload date:
  • Size: 3.3 MB
  • Tags: CPython 3.7m, manylinux: glibc 2.12+ x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.8.9

File hashes

Hashes for smoldyn-2.65.dev20210428-cp37-cp37m-manylinux2010_x86_64.whl
Algorithm Hash digest
SHA256 87aff00b1982930fd4bce5afb170ffa95e7660b7b93223a3eb7b382703000481
MD5 4d3dcd73f6bb40e746b81d98c492996b
BLAKE2b-256 49af85a456edfc0a719767f9afd39cbc6d7051909be9591aee84f1e7972f4e9e

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page