Convert Snapgene *.dna files dict/json/biopython.
Project description
SnapGene Reader is a Python library to parse Snapgene *.dna files into dictionnaries or Biopython SeqRecords:
from snapgene_reader import snapgene_file_to_dict, snapgene_file_to_seqrecord
file_path = './snap_gene_file.dna'
dictionnary = snapgene_file_to_dict(filepath)
seqrecord = snapgene_file_to_seqrecord(filepath)
Installation
Install with PIP:
pip install snapgene_reader
Test with Pytest:
python -m pytest
(or simply "pytest")
Licence = MIT
SnapGene Reader is an open-source software originally written by Isaac Luo at the Cai Lab. This fork is released on Github under the MIT licence (¢ Isaac Luo and Cai Lab) and maintained by the Edinburgh Genome Foundry. Everyone is welcome to contribute.
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snapgene_reader-0.1.13.tar.gz
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