To convert snirf file to bids format.
Project description
snirf2BIDS
Conveniently generate BIDS files from SNIRF files.
Installation
pip install snirf2bids
snirf2bids requires Python > 3.
Usage
A SNIRF file with a valid BIDS name can be converted into BIDS metadata text files.
For use with snirf2bids, a SNIRF file name must include at least the sub-
and task-
entitites and end in _nirs.snirf
, i.e. sub-01_task-tapping_nirs.snirf
.
Create BIDS text files from a SNIRF file
snirf2bids.snirf2bids('<path to snirf file>', '<folder to generate files in>')
Export BIDS text files in JSON Format
s = snirf2bids.snirf2json('<path to snirf file>') # Returns serialized JSON in which keys are filenames and values are their contents
Contributors
Developed by BU BME Senior Design Group 3 (2022): Christian Arthur, Jeonghoon Choi, Jiazhen Liu, Juncheng Zhang and the Boston University Neurophotonics Center.
@Christian Arthur :melon:
@Juncheng Zhang :tangerine:
@Jeonghoon Choi :pineapple:
@Jiazhen Liu :grapes:
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