A top up tool to enhance SNV calling from Nanopore sequencing data.
Reason this release was yanked:
Tensorflow dependency unmet in python3.9
Project description
SNVoter
A top up tool to enhance SNV calling from Nanopore sequencing data.
Installation
Using pypi repository
pip install snvoter
Using conda
TBD
From source
git clone https://github.com/vahidAK/SNVoter.git
cd SNVoter
./snvoter.py
Creation of a dedicated conda environment
SNVoter uses several fixed versions of its dependencies. Users are encouraged to use a conda or similar environment to isolate the packages from their default python instance. An environment file is available in the GitHub repository.
git clone https://github.com/vahidAK/SNVoter.git
conda env create -f SNVoter/env/environment.yaml
conda activate snvoter
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