Skip to main content

The SolveBio Python client

Project description

[![Build Status](https://travis-ci.org/solvebio/solvebio-python.svg?branch=master)](http://travis-ci.org/solvebio/solvebio-python)


SolveBio Python Client
======================

This is the SolveBio Python package and command-line interface (CLI).
This module has been tested on Python 2.6+, Python 3.1+ and PyPy.

This version of the Python Client is compatible with Vault-based datasets
only (released on July 28th, 2017).

Developer documentation is available at [docs.solvebio.com](https://docs.solvebio.com). For more information about SolveBio visit [www.solvebio.com](https://www.solvebio.com).


Dependencies (Ubuntu)
--------------------

When installing SolveBio on Ubuntu (version 14 and up), you may need the
following dependencies:

* libgnutls-dev
* libcurl4-gnutls-dev

To install them, run:

sudo apt-get install libcurl4-gnutls-dev libgnutls-dev


Installation & Setup
--------------------

Install `solvebio` using `pip`:

pip install solvebio


For interactive use, we recommend installing `IPython` and `gnureadline`:

pip install ipython
pip install gnureadline


To log in, type:

solvebio login


Enter your SolveBio credentials and you should be good to go!


Automatic Installer (Python 2.x only)
-------------------------------------

NOTE: The following installer works for Python 2.x only.

Open your terminal and paste the following command:

curl -skL install.solvebio.com/python | bash


Install from Git
----------------

pip install -e git+https://github.com/solvebio/solvebio-python.git#egg=solve


Development
-----------

git clone https://github.com/solvebio/solvebio-python.git
cd solve-python/
python setup.py develop

To run tests use `nosetest`:

nosetests solvebio.test.test_dataset


Or install `tox` and run:

pip install tox
tox


Support
-------

Developer documentation is available at [docs.solvebio.com](https://docs.solvebio.com).

If you experience problems with this package, please [create a GitHub Issue](https://github.com/solvebio/solvebio-python/issues).

For all other requests, please [email SolveBio Support](mailto:support@solvebio.com).

Project details


Release history Release notifications

History Node

2.5.0

History Node

2.4.6

This version
History Node

2.4.5

History Node

2.4.4

History Node

2.4.3

History Node

2.4.2

History Node

2.4.1

History Node

2.4.0

History Node

2.3.3

History Node

2.3.2

History Node

2.3.1

History Node

2.3.0

History Node

2.2.1

History Node

2.2.0

History Node

2.1.0

History Node

2.0.1

History Node

2.0.0

History Node

1.17.1

History Node

1.17.0

History Node

1.16.0

History Node

1.15.4

History Node

1.15.2

History Node

1.15.1

History Node

1.15.0

History Node

1.14.2

History Node

1.14.1

History Node

1.14.0

History Node

1.13.6

History Node

1.13.4

History Node

1.13.3

History Node

1.13.2

History Node

1.13.1

History Node

1.12.1

History Node

1.12.0

History Node

1.11.0

History Node

1.10.0

History Node

1.9.1

History Node

1.9.0

History Node

1.8.1

History Node

1.8.0

History Node

1.7.11

History Node

1.7.10

History Node

1.7.8

History Node

1.7.7

History Node

1.7.6

History Node

1.7.5

History Node

1.7.4

History Node

1.7.3

History Node

1.7.2

History Node

1.7.1

History Node

1.7.0

History Node

1.6.1

History Node

1.6.0

History Node

1.5.2

History Node

1.5.1

History Node

1.5.0

History Node

1.4.0

History Node

1.3.4

History Node

1.3.3

History Node

1.3.2

History Node

1.2.2

History Node

1.2.1

History Node

1.2.0

History Node

1.1.0

History Node

1.0.6

History Node

1.0.5

History Node

1.0.4

History Node

1.0.3

History Node

1.0.2

History Node

1.0.1

History Node

1.0.0

History Node

0.2.1

History Node

0.2.0

History Node

0.1.12

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Filename, size & hash SHA256 hash help File type Python version Upload date
solvebio-2.4.5.tar.gz (2.3 MB) Copy SHA256 hash SHA256 Source None Feb 13, 2018

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging CloudAMQP CloudAMQP RabbitMQ AWS AWS Cloud computing Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page