The SolveBio Python client
Project description
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SolveBio Python Client
This is the SolveBio Python package and command-line interface (CLI). This module has been tested on Python 2.6+, Python 3.1+ and PyPy.
This version of the Python Client is compatible with Vault-based datasets only (released on July 28th, 2017).
Developer documentation is available at [docs.solvebio.com](https://docs.solvebio.com). For more information about SolveBio visit [www.solvebio.com](https://www.solvebio.com).
Dependencies (Ubuntu)
When installing SolveBio on Ubuntu (version 14 and up), you may need the following dependencies:
libgnutls-dev
libcurl4-gnutls-dev
To install them, run:
sudo apt-get install libcurl4-gnutls-dev libgnutls-dev
Installation & Setup
Install solvebio using pip:
pip install solvebio
For interactive use, we recommend installing IPython and gnureadline:
pip install ipython pip install gnureadline
To log in, type:
solvebio login
Enter your SolveBio credentials and you should be good to go!
Automatic Installer (Python 2.x only)
NOTE: The following installer works for Python 2.x only.
Open your terminal and paste the following command:
curl -skL install.solvebio.com/python | bash
Install from Git
pip install -e git+https://github.com/solvebio/solvebio-python.git#egg=solve
Development
git clone https://github.com/solvebio/solvebio-python.git cd solve-python/ python setup.py develop
To run tests use nosetest:
nosetests solvebio.test.test_dataset
Or install tox and run:
pip install tox tox
Support
Developer documentation is available at [docs.solvebio.com](https://docs.solvebio.com).
If you experience problems with this package, please [create a GitHub Issue](https://github.com/solvebio/solvebio-python/issues).
For all other requests, please [email SolveBio Support](mailto:support@solvebio.com).
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