Skip to main content

sourmash plugin to do pangenomics.

Project description

sourmash_plugin_pangenomics: tools for sourmash-based pangenome analyses

Installation

pip install sourmash_plugin_pangenomics

Usage

more here @CTB

Support

We suggest filing issues in the main sourmash issue tracker as that receives more attention!

Dev docs

sourmash_plugin_pangenomics is developed at https://github.com/sourmash-bio/sourmash_plugin_pangenomics.

Testing

Run:

pytest tests

Generating a release

Bump version number in pyproject.toml and push.

Make a new release on github.

Then pull, and:

python -m build

followed by twine upload dist/....

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

sourmash_plugin_pangenomics-0.1.tar.gz (8.1 kB view hashes)

Uploaded Source

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page