sourmash plugin to do pangenomics.
Project description
sourmash_plugin_pangenomics: tools for sourmash-based pangenome analyses
Installation
pip install sourmash_plugin_pangenomics
Usage
more here @CTB
Support
We suggest filing issues in the main sourmash issue tracker as that receives more attention!
Dev docs
sourmash_plugin_pangenomics is developed at https://github.com/sourmash-bio/sourmash_plugin_pangenomics.
Testing
Run:
pytest tests
Generating a release
Bump version number in pyproject.toml and push.
Make a new release on github.
Then pull, and:
python -m build
followed by twine upload dist/....
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
File details
Details for the file sourmash_plugin_pangenomics-0.1.tar.gz.
File metadata
- Download URL: sourmash_plugin_pangenomics-0.1.tar.gz
- Upload date:
- Size: 8.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.2 CPython/3.11.6
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 47ef37b8921d88ed3d0c9f264095473c7eb1121baf0cd774a1a3f08cd06c70c8 |
|
| MD5 | ac4b9972b918bb91a4a0a4adb0f1acdb |
|
| BLAKE2b-256 | 4d61e13cdc9b55d1800aad7a3363dc9ae6b85ed9447b394f900a1d5190697b9c |
