Utility for merging RNA-seq expression counts files from St. Jude Cloud.
Project description
merge-counts
Utility for merging RNA-seq expression counts files from St. Jude Cloud.
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📚 Getting Started
Installation
You can install merge-counts using the Python Package Index (PyPI).
pip install merge-counts
🖥️ Development
If you are interested in contributing to the code, please first review our CONTRIBUTING.md document.
To bootstrap a development environment, please use the following commands.
# Clone the repository
git clone git@github.com:stjudecloud/merge-counts.git
cd merge-counts
# Install the project using poetry
poetry install
🚧️ Tests
merge-counts provides a (currently patchy) set of tests — both unit and end-to-end.
py.test
🤝 Contributing
Contributions, issues and feature requests are welcome!
Feel free to check issues page. You can also take a look at the contributing guide.
📝 License
This project is licensed under the MIT License—see the LICENSE.md file for details.
Copyright © 2020 St. Jude Cloud Team.
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