Utility for merging RNA-seq expression counts files from St. Jude Cloud.
Project description
merge-counts
Utility for merging RNA-seq expression counts files from St. Jude Cloud.
Request Feature
·
Report Bug
·
⭐ Consider starring the repo! ⭐
📚 Getting Started
Installation
You can install merge-counts using the Python Package Index (PyPI).
pip install merge-counts
🖥️ Development
If you are interested in contributing to the code, please first review our CONTRIBUTING.md document.
To bootstrap a development environment, please use the following commands.
# Clone the repository
git clone git@github.com:stjudecloud/merge-counts.git
cd merge-counts
# Install the project using poetry
poetry install
🚧️ Tests
merge-counts provides a (currently patchy) set of tests — both unit and end-to-end.
py.test
🤝 Contributing
Contributions, issues and feature requests are welcome!
Feel free to check issues page. You can also take a look at the contributing guide.
📝 License
This project is licensed under the MIT License—see the LICENSE.md file for details.
Copyright © 2020 St. Jude Cloud Team.
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for stjudecloud-merge-counts-1.1.0.tar.gz
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 9716daa724169b108b295d58aa950fa755f11403f9db471331b32c05021bf57d |
|
| MD5 | 9f8cebbf1b0416eb95d8851c37e5bfa9 |
|
| BLAKE2b-256 | 3009c1f974fed05969f49cedf924cf40c046c36b44b105f29ef5dc08a6060581 |
Hashes for stjudecloud_merge_counts-1.1.0-py3-none-any.whl
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 12aaa80f6c11bec2dd5cbd854d8b7d9f7c468dc051f558739834d4d1dfbf2bab |
|
| MD5 | 2b9e026e42f08d12f5d08102bd112733 |
|
| BLAKE2b-256 | a8c12f530a45f52777c8735b200f3eef0882e04d11ac02040546e775235fdcc1 |
