Skip to main content

Stratified random assignment using pandas

Project description

Stochatreat

Build typing-and-tests Coverage Status
PyPI pypi PyPI Downloads
conda-forge Conda conda-downloads
Meta Hatch project linting - Ruff types - Mypy License - MIT

Introduction

This is a Python tool to employ stratified randomization or sampling with uneven numbers in some strata using pandas. Mainly thought with randomized controlled trials (RCTs) in mind, it also works for any other scenario in where you would like to randomly allocate treatment within blocks or strata. The tool also supports having multiple treatments with different probability of assignment within each block or stratum.

Installation

PyPI

You can install this package via pip:

pip install stochatreat

Conda

You can also install this package with conda:

conda install -c conda-forge stochatreat

Usage

Single cluster:

from stochatreat import stochatreat
import numpy as np
import pandas as pd

# make 1000 households in 5 different neighborhoods.
np.random.seed(42)
df = pd.DataFrame(
    data={"id": list(range(1000)), "nhood": np.random.randint(1, 6, size=1000)}
)

# randomly assign treatments by neighborhoods.
treats = stochatreat(
    data=df,  # your dataframe
    stratum_cols="nhood",  # the blocking variable
    treats=2,  # including control
    idx_col="id",  # the unique id column
    random_state=42,  # random seed
    misfit_strategy="stratum",
)  # the misfit strategy to use
# merge back with original data
df = df.merge(treats, how="left", on="id")

# check for allocations
df.groupby("nhood")["treat"].value_counts().unstack()

# previous code should return this
treat    0    1
nhood
1      105  105
2       95   95
3       95   95
4      103  103
5      102  102

Multiple clusters and treatment probabilities:

from stochatreat import stochatreat
import numpy as np
import pandas as pd

# make 1000 households in 5 different neighborhoods, with a dummy indicator
np.random.seed(42)
df = pd.DataFrame(
    data={
        "id": list(range(1000)),
        "nhood": np.random.randint(1, 6, size=1000),
        "dummy": np.random.randint(0, 2, size=1000),
    }
)

# randomly assign treatments by neighborhoods and dummy status.
treats = stochatreat(
    data=df,
    stratum_cols=["nhood", "dummy"],
    treats=2,
    probs=[1 / 3, 2 / 3],
    idx_col="id",
    random_state=42,
    misfit_strategy="global",
)
# merge back with original data
df = df.merge(treats, how="left", on="id")

# check for allocations
df.groupby(["nhood", "dummy"])["treat"].value_counts().unstack()

# previous code should return this
treat         0   1
nhood dummy
1     0      37  75
      1      33  65
2     0      35  69
      1      29  57
3     0      30  58
      1      34  68
4     0      36  72
      1      32  66
5     0      33  68
      1      35  68

Contributing

If you'd like to contribute to the package, make sure you read the contributing guide.

References

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

stochatreat-0.1.4.tar.gz (20.4 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

stochatreat-0.1.4-py3-none-any.whl (8.3 kB view details)

Uploaded Python 3

File details

Details for the file stochatreat-0.1.4.tar.gz.

File metadata

  • Download URL: stochatreat-0.1.4.tar.gz
  • Upload date:
  • Size: 20.4 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.7

File hashes

Hashes for stochatreat-0.1.4.tar.gz
Algorithm Hash digest
SHA256 4d78482eba423cb7f131af48a08a90a87326639b7ff36ba08b519161b1d2cb6a
MD5 b3a089027079714618435f91d32aa4b2
BLAKE2b-256 81a2ce7aae562f0b3215fbebe199085df04f531861008ec5acf0f7ae5d9b00f0

See more details on using hashes here.

Provenance

The following attestation bundles were made for stochatreat-0.1.4.tar.gz:

Publisher: release-and-publish.yml on manmartgarc/stochatreat

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file stochatreat-0.1.4-py3-none-any.whl.

File metadata

  • Download URL: stochatreat-0.1.4-py3-none-any.whl
  • Upload date:
  • Size: 8.3 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.7

File hashes

Hashes for stochatreat-0.1.4-py3-none-any.whl
Algorithm Hash digest
SHA256 c8c257b236731a05e3991e6ff269fafe422a74ba8b04fa28dec5b8fd752ea178
MD5 a5d918210119ae910fae92fa024a88cf
BLAKE2b-256 49b5f42c1442033057b54d9718c10ad4ffaa870372c1fe808470bf9b75bfc561

See more details on using hashes here.

Provenance

The following attestation bundles were made for stochatreat-0.1.4-py3-none-any.whl:

Publisher: release-and-publish.yml on manmartgarc/stochatreat

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page