STPT scan to Zarr conversion
Project description
STPT to Zarr converter
Convert STPT scan dataset to Zarr.
Install
pip install stpt2zarr
Requirements
- click
- dask
- distributed
- imaxt_image
- python_dateutil
- xarray
- zarr
Usage
Arguments
- input_path: the root folder of the STPT scan containing a mosaic file
- output_path: the location where to store the converted output in Zarr format
From Python script
from stpt2zarr import stpt2zarr
stpt2zarr(input_path, output_path)
From the command line
stpt2zarr input_path output_path
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
stpt2zarr-0.1.8.tar.gz
(7.8 kB
view details)
Built Distribution
File details
Details for the file stpt2zarr-0.1.8.tar.gz.
File metadata
- Download URL: stpt2zarr-0.1.8.tar.gz
- Upload date:
- Size: 7.8 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.2 CPython/3.11.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 93446f506e89d251989004a03ca074a887016edd80ab381216fcb796b10b89f1 |
|
| MD5 | 998350682eeabb8be1b01171e0dd3951 |
|
| BLAKE2b-256 | dea6c03af66063ea6988854e292bba13fe93c52019341fdd56825b04d011d386 |
File details
Details for the file stpt2zarr-0.1.8-py3-none-any.whl.
File metadata
- Download URL: stpt2zarr-0.1.8-py3-none-any.whl
- Upload date:
- Size: 8.9 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.2 CPython/3.11.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | d8168cea58d582280f6682f76dfe8d0b6a8e4b2b6706c0baf69cdf74ce442db6 |
|
| MD5 | 04e62b896cb15db0b9eeaa2a4241d078 |
|
| BLAKE2b-256 | 8dff8f42929d6fef4fea1f6e8e2fd22bf1d526237b0665339e54f13e31013c52 |
