Skip to main content

One efficient and accurate strain-level microbiome composition analysis tool based on reference genomes and k-mers.

Project description

StrainScan takes reference database and sequencing data as input, outputs strain-level microbiome compistion analysis report.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

strainscan-1.0.8.tar.gz (6.3 MB view details)

Uploaded Source

Built Distribution

strainscan-1.0.8-py3-none-any.whl (6.4 MB view details)

Uploaded Python 3

File details

Details for the file strainscan-1.0.8.tar.gz.

File metadata

  • Download URL: strainscan-1.0.8.tar.gz
  • Upload date:
  • Size: 6.3 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.0 CPython/3.7.3

File hashes

Hashes for strainscan-1.0.8.tar.gz
Algorithm Hash digest
SHA256 1d37c4577fb7c1b59844efc068046acd09e77bad67dd27feb09d3614896173e3
MD5 36b28f33bd89933e39303aa905e28fc8
BLAKE2b-256 f54e711fc465466c94f2d642e58210b68cf06554a5f3bb648d2bbf4b83c009b7

See more details on using hashes here.

File details

Details for the file strainscan-1.0.8-py3-none-any.whl.

File metadata

  • Download URL: strainscan-1.0.8-py3-none-any.whl
  • Upload date:
  • Size: 6.4 MB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.0 CPython/3.7.3

File hashes

Hashes for strainscan-1.0.8-py3-none-any.whl
Algorithm Hash digest
SHA256 6114a20f2f3ca095989aed1a4917d218dc21b603d6be23f5e8d09cee584d45ca
MD5 fed702d96344acb619ad2a565a72beb2
BLAKE2b-256 cb1fc099c25d09944ce6d5430e67a4b13cd7a9c3c2ea61ffa47f61ab3acc5e67

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page