# Overview
Randomly alter fasta files by substracting a given % of genes in a genome (fasta) or in a (% of a) set of genomes
Free software: CeCILL 2.1 Free Software License
## Installation
pip install subsample-fastas
## Documentation
To use the project:
` python import subsample_fastas subsample_fastas.longest() `
## Development
To run the all tests run:
tox
Note, to combine the coverage data from all the tox environments run:
<table> <colgroup> <col style=”width: 10%” /> <col style=”width: 90%” /> </colgroup> <tbody> <tr class=”odd”> <td>Windows</td> <td><pre><code>set PYTEST_ADDOPTS=–cov-append tox</code></pre></td> </tr> <tr class=”even”> <td>Other</td> <td><pre><code>PYTEST_ADDOPTS=–cov-append tox</code></pre></td> </tr> </tbody> </table>
# Changelog
All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
## [Unreleased] - 0.0.0 (<TODAY>) ——————
Work in progress
1 maintainer
Metadata
1 maintainer
Release files for subsample-fastas 0.0.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| subsample-fastas-0.0.0.tar.gz | 3.5 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| subsample_fastas-0.0.0-py2.py3-none-any.whl | Python 3, Python 2 | none | any | Details |
Total release size: 3.5 MB
Release files / subsample-fastas-0.0.0.tar.gz
| Download URL | subsample-fastas-0.0.0.tar.gz |
|---|---|
| Size | 3.5 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.22.0 setuptools/45.1.0 requests-toolbelt/0.9.1 tqdm/4.42.0 CPython/3.7.6
|
Release files / subsample_fastas-0.0.0-py2.py3-none-any.whl
| Download URL | subsample_fastas-0.0.0-py2.py3-none-any.whl |
|---|---|
| Size | 13.8 kB |
| Tags | Python 2 Python 3 |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.22.0 setuptools/45.1.0 requests-toolbelt/0.9.1 tqdm/4.42.0 CPython/3.7.6
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