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Randomly alter fasta files by substracting a given % of genes in a genome (fasta) or in a (% of a) set of genomes

Project description

# Overview

Randomly alter fasta files by substracting a given % of genes in a genome (fasta) or in a (% of a) set of genomes

  • Free software: CeCILL 2.1 Free Software License

## Installation

pip install subsample-fastas

## Documentation

To use the project:

` python import subsample_fastas subsample_fastas.longest() `

## Development

To run the all tests run:

tox

Note, to combine the coverage data from all the tox environments run:

<table> <colgroup> <col style=”width: 10%” /> <col style=”width: 90%” /> </colgroup> <tbody> <tr class=”odd”> <td>Windows</td> <td><pre><code>set PYTEST_ADDOPTS=–cov-append tox</code></pre></td> </tr> <tr class=”even”> <td>Other</td> <td><pre><code>PYTEST_ADDOPTS=–cov-append tox</code></pre></td> </tr> </tbody> </table>

# Changelog

All notable changes to this project will be documented in this file.

The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [Unreleased] - 0.0.0 (<TODAY>) ——————

  • Work in progress

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