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Subset National Water Model (NWM) NetCDF Ver1.1

Project description

# Subset National Water Model (NWM) NetCDF

Note that the deployment schedule of new National Water Model (NWM) Ver1.1 got delayed until May 4th 2017 according to its official notice:

NWM's daily output is about 400GB worth of NetCDF files that contain meteorological and hydrologic data/forecasts covers the whole U.S.
This python library enables users to subset NWM Ver1.1 NetCDF using a polygon that represents a region of interest, which can significantly reduce data storage size and speed up regional data access.

More about NWM:

## Version naming convention:
"1.1.4", where "1.1" means NWM Ver1.1 and "4" is the version of this library.

## Workflow:
user-provided polygon --> Spatial Query module* --> stream comids & reservoir comids & grid cell indices (forcing & land & terrain) -->
Subset module --> Merge module --> regional NetCDF files

*: Spatial Query is optional if user directly provides stream comids & reservoir comids & grid cells indices

## Usage
See in source

The copy of the resulting NetCDF files of TwoMileCreek watershed can be found at

The watershed poylgon shapefiel is at /

## What's new in 1.1.4 ?

Use a new approach to perform spatial query on grid cell indices against forcing, land and terrain files;
Further improve spatial query speed on grid cells;
Further address partially covered grids caused by projection distortion;
Deprecate Tiff supporting files. Now the only necessary supporting file is the sqlite/spatialite geodatabase for stream, reservoir and HUCs;
Remove GDAL; Add pyproj and numpy to dependency list;

## What's new in 1.1.3 ?
1) Support subsetting more files:

1-1) "tm01" and "tm02" of each time stamp in analysis_assim model configuration

1-2) the "terrain" files in all model configurations

2) speed up spatial query on grid files (forcing, land and terrain) using GDAL and further reduce size of supporting files

3) add GDAL as a new dependency

## What's new in 1.1.2 and 1.1.1?

First two releases

## Environment and Dependencies:
Preliminary functional testings passed with Python 2.7.12 x64 on Windows 7 x64 and Ubuntu 16.04 x64.

### Spatial Query module:

1) fiona >= 1.7.5 @

2) shapely >= 1.5.17 @

3) pysqlite >= 2.8.3 with mod_spatialite extension @ and

4) numpy >= 1.12.1 @

5) pyproj >= @

6) spatial query supporting files (1.1.4) @

### Subset & Merge module

1) NetCDF utilities >= 4.4 (shell commands) @

2) NCO >= 4.6.3 (shell commands) @

3) numpy >= 1.12.1 @

4) netCDF4 >= 1.2.7 python wrapper for NetCDF4 @

5) sed (shell command): Linux systems include this command by default. This lib contains a GNU sed binary for Windows

Implementation inspired by:

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