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Manipulate vcf files of structural variants using SURVIVOR

Project description


A python wrapper around SURVIVOR, with additional convenience functions.


merge               merging vcf files of SVs
highsens            get union of SV vcfs
highconf            get intersection of SV vcfs
prf                 calculate precision, recall and F-measure
upset               Make upset plot for multiple SV vcf files

Each sub-command has its own help information, accessible by running surpyvor <command> -h/--help

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