The slick way to process SWC files.
Project description
swick
is the slick way to process SWC files—which contain tree-like representations of neuron structures—in Python.
Reading, writing, combining, splitting, and validating SWC files can be done in just a few lines. Objects to represent SWC files are also provided, laying the groundwork for custom analysis or modification of SWCs in Python.
Installation
To install swick
via pip, simply:
pip install swick
Or to upgrade an existing installation:
pip install swick --upgrade
Usage & Documentation
Documentation is automatically built via a Github Actions workflow and hosted on Github Pages. Reading it is the best way to get started with swick
. For any questions not addressed there, please feel free to open an issue!
Here are some links to relevant documentation:
Project details
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