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Project description

fifteen

(DBA table_five)

Experimental library for quick quintet tallying, useful when you have a lot of quintets that somehow you don't want to count yourself.

Usage

Binary wheels are provided on PyPI

python3 -m pip install table_five

API

`TreeSet`

A treeset is an efficient (i.e., fast parsing) list of tree topologies. The construction is $O(k n \lg n)$ where $k$ is the number of trees and $n$ the number of taxa due to the LCA data structure initialization.

from table_five import TreeSet
trees = TreeSet("path_to_newline_delimited_newicks.tre")

Project details

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Release history Release notifications | RSS feed

0.0.2

Jul 27, 2022

This version

0.0.1

Jul 27, 2022

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