Skip to main content

Consensus layout of topologically associating domains (TADs) and utilities for RNA-seq analysis

Project description

Topologically associating domains (TADs) are contiguous segments of the genome where the genomic elements are in frequent contact with each other. The TAD Map provides a consensus estimate, aggregated from multiple experimental datasets, of this layout in human and mouse. It also provides tools to map any single-cell RNA-seq dataset to TAD signatures, with gene expression mapped to TAD activation probabilities in each cell

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

tadmap-0.1.2.tar.gz (633.2 kB view details)

Uploaded Source

Built Distribution

tadmap-0.1.2-py3-none-any.whl (13.0 kB view details)

Uploaded Python 3

File details

Details for the file tadmap-0.1.2.tar.gz.

File metadata

  • Download URL: tadmap-0.1.2.tar.gz
  • Upload date:
  • Size: 633.2 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.3.0 pkginfo/1.7.0 requests/2.25.1 setuptools/52.0.0.post20210125 requests-toolbelt/0.9.1 tqdm/4.56.0 CPython/3.7.9

File hashes

Hashes for tadmap-0.1.2.tar.gz
Algorithm Hash digest
SHA256 6365694008b19b38050c3106e140ed71338cf6b36cc64bf86940d8ce35c63995
MD5 cd9cf044ee2a168c3f0f9669bd51ffa7
BLAKE2b-256 319748508c6bbb64f9b6affd39bf455a0cc9fb0a2f7be5e7336a27aef23a20e4

See more details on using hashes here.

File details

Details for the file tadmap-0.1.2-py3-none-any.whl.

File metadata

  • Download URL: tadmap-0.1.2-py3-none-any.whl
  • Upload date:
  • Size: 13.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.3.0 pkginfo/1.7.0 requests/2.25.1 setuptools/52.0.0.post20210125 requests-toolbelt/0.9.1 tqdm/4.56.0 CPython/3.7.9

File hashes

Hashes for tadmap-0.1.2-py3-none-any.whl
Algorithm Hash digest
SHA256 77552e88b9d47d6837403b518a0f7df7c2c90394a19472db28b141c1f3e35110
MD5 29860ea50378ba8a6cd813031ad0d6a3
BLAKE2b-256 92d38b50e39e44074e69d62544f973bd6a9c4a01e7dea49df20dc7c4555492b3

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page