TeDa FITS Viewer
Project description
TeDa FITS Viewer
Observatory optimized FITS Images viewer
Key Features
- Flexible windows and widgets layout
- WCS support
- Radial Profile with gaussoide fit (try
r
-key) - Scan mode: observes directory for changes and automatically opens new FITS
- Integrated ipython console with direct access to data and application
Installation
pip install teda
teda_viewer
Optional dependencies
To use ipython console the qtconsole
package is needed, additionally:
pip install qtconsole
For directory scanning functionality, the watchdog
package should be installed, e.g.
pip install watchdog
Run
The installation scripts should install the command:
teda_viewer
Try
teda_viewer --help
for list of command line parameters.
Dynamic Scale and Color
The dynamic scale of the image, and color mapping can be adjusted form the Dynamic Scale panel. From menu: View/Dynamic Scale
Fits Header Cards Pinning
On the FITS Header panel, selected keys can be pinned to appear on the top ot the list. This can be done via context (right-click) menu.
The set of pinned keys is saved and preserved between sessions.
Radial Profile
The Radial Profile button turns on the mode of selecting targets for the radial profile analysis. Make sure the radial profile panel is visible (View/Radial Profile). The shortcut for displaying radial profile of the star under cursor is the R-key.
The centroid of the star is corrected within small (be precise!) radius using the bivariate gaussoide fit.
Together with the pixels values, the radial profile presents 1D fit of "gaussian(r) + sky". This fit provides information of presented fwhm and sky level.
Integrated Python Console
In order to use integrated python console the qtconsole
module, and it's
dependencies (jupyter related) have to be installed. This is not done by
default pip
installation to keep number of dependencies reasonably small.
Install qtconsole
by:
pip install qtconsole
The console is available form menu View/Python Console
Predefined variables
The console has a number of predefined variables set:
ax: WCSAxesSubplot
main plotting axes.window: MainWindow
main windowdata: numpy.ndarray
current HDU dataheader: astropy.fits.Header
current HDU headerwcs: astropy.wcs.WCS
the WCS transformer
Plotting
To plot directly on the console, run the following magic command %matplotlib inline
.
When plotting on the main canvas, the result will appear after redrawing
main figure by ax.figure.canvas.draw()
.
The example below, draws linear profile on the console and corresponding line on the main FITS display:
%matplotlib inline
import matplotlib.pyplot as plt
ax.plot([10,30], [10,10])
ax.figure.canvas.draw()
plt.plot(data[10,10:30])
Directory Scan
The Scan Toolbar (hidden by default) provides controls for the directory scanning mode.
This mode is intended to observe newly created FITS files in observatory.
After pressing Scan button, and choosing directory, TeDa Fits Viewer will load most recent FITS file from that directory, and keep watching the directory for changes. When new FITS file is added to directory, it will be loaded automatically.
User can pause scanning using Pause button. There is also auto pause feature, when active, any mouse movement in the main area pauses scanning for 5 seconds, avoiding FITS reload when working.
After un-pausing (manually or after idle 5 seconds when auto-pause) the newest FITS will be loaded if any new files appeared during the pause.
Directory scanning needs the watchdog
component to be
installed manually (optional dependence).
Directory Panel
The Directory Panel can be shown using menu command View-Directory view.
The Directory Panel is convenient files navigator. The panel has two views:
- Directory Tree
- Files List
User can collapse any of them using divider handle and use only remaining one. If the tree view is the only visible, it shows directories and files as well.
Development version install
git clone https://github.com/majkelx/teda.git
cd teda
python -m venv venv
source ./venv/bin/activate
pip install -r requirements.txt
pip install -e .
Bugs, remarks, greetings and contribution
Please use GitHub issues tracker and pull requests.
@2020 AkondLab for the Araucaria Project.
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