A package for quantifying cyclic molecule conformations.
Project description
==========
Tessellate
==========
.. image:: https://img.shields.io/pypi/v/tessellate.svg
:target: https://pypi.python.org/pypi/tessellate
.. image:: https://img.shields.io/travis/chrisbarnettster/tessellate.svg
:target: https://travis-ci.org/chrisbarnettster/tessellate
.. image:: https://readthedocs.org/projects/tessellate/badge/?version=latest
:target: https://tessellate.readthedocs.io/en/latest/?badge=latest
:alt: Documentation Status
.. image:: https://pyup.io/repos/github/chrisbarnettster/tessellate/shield.svg
:target: https://pyup.io/repos/github/chrisbarnettster/tessellate/
:alt: Updates
A package for quantifying cyclic molecule conformations.
* Free software: Apache Software License 2.0
* Documentation: https://tessellate.readthedocs.io.
Using
-----
`make install; tessellate data/example-builtin --input-format=builtin --output-format=json `
`make install; tessellate data/*DNA --input-format=pdblist --output-format=json `
Features
--------
* Improve testing and documentation
* Tables
* Merge in tcl scripts and VMD examples
Development
-----------
Bump version numbers using bumpversion
X=thecurrentversion
`bumpversion --current-version X minor`
Uploading to PyPi
-----------------
Use twine
conda install -c conda-forge twine
make install
make dist
twine upload dist/*
Credits
---------
This package incorporates work from existing packages.
* https://bitbucket.org/scientificomputing/triangular-tessellation-class http://git.cem.uct.ac.za/analysis-pucker/triangular-tessellation-class
* https://bitbucket.org/scientificomputing/ring-analytics-webserver https://bitbucket.org/rxncor/rad-dev http://git.cem.uct.ac.za/analysis-pucker/ring-analytics-dash
* https://bitbucket.org/scientificomputing/triangular-tessellation-in-vmd http://git.cem.uct.ac.za/analysis-pucker/triangular-decomposition-timeseries-in-VMD
This package was created with Cookiecutter_ and the `audreyr/cookiecutter-pypackage`_ project template.
.. _Cookiecutter: https://github.com/audreyr/cookiecutter
.. _`audreyr/cookiecutter-pypackage`: https://github.com/audreyr/cookiecutter-pypackage
=======
History
=======
0.3.0 (2017-11-23)
------------------
* First release on PyPi
0.2.0 (2017-11-23)
------------------
* Alpha version that can read PDBlists and builtin, can write json
* Include examples and much verbose logging
0.1.0 (2017-11-21)
------------------
* Alpha version. Basic function
Tessellate
==========
.. image:: https://img.shields.io/pypi/v/tessellate.svg
:target: https://pypi.python.org/pypi/tessellate
.. image:: https://img.shields.io/travis/chrisbarnettster/tessellate.svg
:target: https://travis-ci.org/chrisbarnettster/tessellate
.. image:: https://readthedocs.org/projects/tessellate/badge/?version=latest
:target: https://tessellate.readthedocs.io/en/latest/?badge=latest
:alt: Documentation Status
.. image:: https://pyup.io/repos/github/chrisbarnettster/tessellate/shield.svg
:target: https://pyup.io/repos/github/chrisbarnettster/tessellate/
:alt: Updates
A package for quantifying cyclic molecule conformations.
* Free software: Apache Software License 2.0
* Documentation: https://tessellate.readthedocs.io.
Using
-----
`make install; tessellate data/example-builtin --input-format=builtin --output-format=json `
`make install; tessellate data/*DNA --input-format=pdblist --output-format=json `
Features
--------
* Improve testing and documentation
* Tables
* Merge in tcl scripts and VMD examples
Development
-----------
Bump version numbers using bumpversion
X=thecurrentversion
`bumpversion --current-version X minor`
Uploading to PyPi
-----------------
Use twine
conda install -c conda-forge twine
make install
make dist
twine upload dist/*
Credits
---------
This package incorporates work from existing packages.
* https://bitbucket.org/scientificomputing/triangular-tessellation-class http://git.cem.uct.ac.za/analysis-pucker/triangular-tessellation-class
* https://bitbucket.org/scientificomputing/ring-analytics-webserver https://bitbucket.org/rxncor/rad-dev http://git.cem.uct.ac.za/analysis-pucker/ring-analytics-dash
* https://bitbucket.org/scientificomputing/triangular-tessellation-in-vmd http://git.cem.uct.ac.za/analysis-pucker/triangular-decomposition-timeseries-in-VMD
This package was created with Cookiecutter_ and the `audreyr/cookiecutter-pypackage`_ project template.
.. _Cookiecutter: https://github.com/audreyr/cookiecutter
.. _`audreyr/cookiecutter-pypackage`: https://github.com/audreyr/cookiecutter-pypackage
=======
History
=======
0.3.0 (2017-11-23)
------------------
* First release on PyPi
0.2.0 (2017-11-23)
------------------
* Alpha version that can read PDBlists and builtin, can write json
* Include examples and much verbose logging
0.1.0 (2017-11-21)
------------------
* Alpha version. Basic function
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