Standardise TCR/MHC gene names to IMGT nomenclature.
Project description
tidytcells
tidytcells
is a lightweight Python package written for bioinformaticians who
work with T cell receptor (TCR) data. The main purpose of the package is to
solve the problem of parsing and collating together non-standardised TCR
datasets. It is often difficult to compile TCR data from multiple sources
because the formats/nomenclature of how each dataset encodes TCR and MHC gene
names are slightly different, or even inconsistent within themselves.
tidytcells
attempts to ameliorate this issue by providing simple functions
that can, among other things, standardise TCR and MHC gene names to be
IMGT-compliant.
The package is currently in its alpha stage in development. More thorough documentation will follow soon.
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