A validated computational model of the spread of an antibiotic resistant pathogens in a hospital, with and without our diagnostic tool for quickly identifying it
Project description
Warwick iGEM computational modelling
A repository containing code for custom computational modelling components within the 2021 Warwick team iGEM project.
Model abstract
We propose a validated computational model of the spread of an antibiotic resistant pathogens in a hospital, with and without our diagnostic tool for quickly identifying it, and show that in a relevant scenario it reduces the presence of antibiotic resistant pathogens in our selected scenario, showing our product is beneficial in the real-world.
Summary
We used Python to implement a discrete time, stochastic, compartmental model of the spread of antibiotic resistant pathogens through a population.
Contributions and errata
If you find a bug in the code or an error in the writeup, feel free to submit a pull request or an issue, and we will endeavour to fix it!
Project details
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