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Project description
Tike is a toolbox for tomographic reconstruction of 3D objects from ptychography data.
The aim of Tike is to provide fast and accurate implementations of a wide variety of reconstruction algorithms, and to provide a common platform for the synchrotron research community.
Current Features (March 2021)
Scan
Lissajous and 2D spiral trajectories
hexagonal and rectangular grids
Ptychography
FFT-based operator with linear position interpolation
single-energy
multiple probes per diffraction pattern (multi-mode probes)
probe variation correction (eigen probes)
one shared (multi-modal) probe per angular view
multi-GPU conjugate-gradient descent solver
multi-GPU least-squares + gradient descent solver
Laminography
USFFT-based operator for cubic field-of-view
single tilt angle
multi-GPU conjugate-gradient descent solver
Alignment
Lanczos-based rotation and flow operators
Cross-correlation rigid alignment solver
Citations
This software has a DOI for use in citations.
Gursoy, Doga, and Ching, Daniel J. “Tike.” Computer software. December 01, 2022. https://github.com/AdvancedPhotonSource/tike.git. https://doi.org/10.11578/dc.20230202.1.
Copyright (c) 2018, UChicago Argonne, LLC. All rights reserved.
Copyright 2018. UChicago Argonne, LLC. This software was produced under U.S. Government contract DE-AC02-06CH11357 for Argonne National Laboratory (ANL), which is operated by UChicago Argonne, LLC for the U.S. Department of Energy. The U.S. Government has rights to use, reproduce, and distribute this software. NEITHER THE GOVERNMENT NOR UChicago Argonne, LLC MAKES ANY WARRANTY, EXPRESS OR IMPLIED, OR ASSUMES ANY LIABILITY FOR THE USE OF THIS SOFTWARE. If software is modified to produce derivative works, such modified software should be clearly marked, so as not to confuse it with the version available from ANL.
Additionally, redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:
Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
Neither the name of UChicago Argonne, LLC, Argonne National Laboratory, ANL, the U.S. Government, nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY UChicago Argonne, LLC AND CONTRIBUTORS “AS IS” AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL UChicago Argonne, LLC OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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