tike 0.23.0

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Doga Gursoy Daniel Ching Xiaodong Yu Viktor Nikitin Author-email: [e-mail] License: BSD 3-Clause License Classifier: ‘Development Status :: 3 - Alpha’ Classifier: ‘Intended Audience :: Developers’ Classifier: ‘Intended Audience :: Science/Research’ Classifier: ‘License :: OSI Approved :: BSD License’ Classifier: ‘Natural Language :: English’ Classifier: ‘Operating System :: OS Independent’ Classifier: ‘Programming Language :: Python :: 3 :: Only’ Classifier: ‘Topic :: Scientific/Engineering’ Requires-Python: ~=3.6 Provides-Extra: mpi License-File: LICENSE

Tike

Tike is a toolbox for tomographic reconstruction of 3D objects from ptychography data.

The aim of Tike is to provide fast and accurate implementations of a wide variety of reconstruction algorithms, and to provide a common platform for the synchrotron research community.

Current Features (March 2021)

Scan

• Lissajous and 2D spiral trajectories

• hexagonal and rectangular grids

Ptychography

• FFT-based operator with linear position interpolation

• single-energy

• multiple probes per diffraction pattern (multi-mode probes)

• probe variation correction (eigen probes)

• one shared (multi-modal) probe per angular view

• multi-GPU conjugate-gradient descent solver

• multi-GPU least-squares + gradient descent solver

Laminography

• USFFT-based operator for cubic field-of-view

• single tilt angle

• multi-GPU conjugate-gradient descent solver

Alignment

• Lanczos-based rotation and flow operators

• Cross-correlation rigid alignment solver

Copyright (c) 2018, UChicago Argonne, LLC. All rights reserved.

Copyright 2018. UChicago Argonne, LLC. This software was produced under U.S. Government contract DE-AC02-06CH11357 for Argonne National Laboratory (ANL), which is operated by UChicago Argonne, LLC for the U.S. Department of Energy. The U.S. Government has rights to use, reproduce, and distribute this software. NEITHER THE GOVERNMENT NOR UChicago Argonne, LLC MAKES ANY WARRANTY, EXPRESS OR IMPLIED, OR ASSUMES ANY LIABILITY FOR THE USE OF THIS SOFTWARE. If software is modified to produce derivative works, such modified software should be clearly marked, so as not to confuse it with the version available from ANL.

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