timethese 0.0.6

timeit for multiple functions with better reporting

ired of writing the same code again and again when comparing the runtime of more than one function? timethese helps with this type of micro-benchmarking. It basically runs timeit (or actually repeat) on multiple functions and spits out a report.

In one sentence: timethese is timeit for multiple functions with better reporting

• Free software: MIT License

Installation

pip install timethese

You can also install the in-development version with:

pip install https://github.com/jwbargsten/python-timethese/archive/master.zip

Usage

Microbenchmark

timethese has a 3 step approach:

1. define the functions you want to compare

2. feed them to cmpthese as list or dict (see below)

3. format the results, aka pretty print

Let’s have a look:

from timethese import cmpthese, pprint_cmp, timethese

xs = range(10)


# 1. DEFINE FUNCTIONS

def map_hex():
    list(map(hex, xs))


def list_compr_hex():
    list([hex(x) for x in xs])


def map_lambda():
    list(map(lambda x: x + 2, xs))


def map_lambda_fn():
    fn = lambda x: x + 2
    list(map(fn, xs))


def list_compr_nofn():
    list([x + 2 for x in xs])


# 2. FEED THE FUNCTIONS TO CMPTHESE

# AS DICT:

cmp_res_dict = cmpthese(
    10000,
    {
        "map_hex": map_hex,
        "list_compr_hex": list_compr_hex,
        "map_lambda": map_lambda,
        "map_lambda_fn": map_lambda_fn,
        "list_compr_nofn": list_compr_nofn,
    },
    repeat=3,
)


# OR AS LIST:

cmp_res_list = cmpthese(
    10000, [map_hex, list_compr_hex, map_lambda, map_lambda_fn, list_compr_nofn,], repeat=3,
)

# 3. PRETTY PRINT THE RESULTS

print(pprint_cmp(cmp_res_dict))
print(pprint_cmp(cmp_res_list))

What do you get if you run this?

Depending on the runtime of the supplied functions, either rate (unit: 1/s) or the seconds per iteration (s/iter) are shown.

For dict something like:

                      Rate  list_compr_nofn  map_hex  map_lambda  map_lambda_fn  list_compr_hex
list_compr_nofn  1385057/s                .      43%         47%            48%             88%
        map_hex   969501/s             -30%        .          3%             4%             31%
     map_lambda   940257/s             -32%      -3%           .             1%             27%
  map_lambda_fn   935508/s             -32%      -4%         -1%              .             27%
 list_compr_hex   738367/s             -47%     -24%        -21%           -21%               .

For list something like:

                        Rate  4.list_compr_nofn  0.map_hex  2.map_lambda  3.map_lambda_fn  1.list_compr_hex
4.list_compr_nofn  1360009/s                  .        31%           42%              46%               78%
        0.map_hex  1037581/s               -24%          .            9%              11%               36%
     2.map_lambda   955513/s               -30%        -8%             .               2%               25%
  3.map_lambda_fn   933666/s               -31%       -10%           -2%                .               22%
 1.list_compr_hex   763397/s               -44%       -26%          -20%             -18%                 .

(the function names are taken from fn.__name__ and prefixed with the list index.)

Timing

timethese also has the function timethese, which is used by cmpthese internally. To get the timings directly, you can run:

from timethese import cmpthese, pprint_cmp, timethese

xs = range(10)


# 1. DEFINE FUNCTIONS

def map_hex():
    list(map(hex, xs))


def list_compr_hex():
    list([hex(x) for x in xs])


def map_lambda():
    list(map(lambda x: x + 2, xs))


def map_lambda_fn():
    fn = lambda x: x + 2
    list(map(fn, xs))


def list_compr_nofn():
    list([x + 2 for x in xs])


# 2. FEED THE FUNCTIONS TO CMPTHESE

# AS DICT:

cmp_res_dict = cmpthese(
    10000,
    {
        "map_hex": map_hex,
        "list_compr_hex": list_compr_hex,
        "map_lambda": map_lambda,
        "map_lambda_fn": map_lambda_fn,
        "list_compr_nofn": list_compr_nofn,
    },
    repeat=3,
)

Timing functions with decorators

timethese also provides decorators to time single functions:

import time
import timethese

@timethese.print_time
def calculate_something():
    time.sleep(1)

calculate_something()

Four decorators are provided, 2 for normal stuff

• timethese.print_time

• timethese.log_time(logger, level=logging.INFO)

and 2 for pandas dataframes (they also print the shape of the resulting dataframe). Useful when using df.pipe(...)

• timethese.log_time_df(logger, level=logging.INFO)

• timethese.print_time_df

E.g. to log execution times of pipe operations on pandas dataframes, you could write:

import time
import logging
import timethese
import numpy as np
import pandas as pd

logging.basicConfig(level=logging.DEBUG)

logger = logging.getLogger(__name__)


@timethese.log_time_df(logger, logging.DEBUG)
def sum_by_group(df):
    time.sleep(1)  # introduce some artificial delay
    return df.groupby("A").sum()


df = pd.DataFrame({"A": np.arange(100) % 2, "B": np.random.normal(size=100)})

res = df.pipe(sum_by_group)

See the function documentation in the source code for better examples.

Development

To run the all tests run:

tox

Note, to combine the coverage data from all the tox environments run:

Windows	set PYTEST_ADDOPTS=--cov-append tox
Other	PYTEST_ADDOPTS=--cov-append tox

See also

The idea came from Perl’s Benchmark.pm, which I used a lot in the Good Ol’ Days.

Changelog

0.0.6 (2020-05-31)

• improved documentation

• fixed setup.py install dependencies to again pass travis tests

0.0.5 (2020-05-31)

• Added better documentations

• Now using NumPy documentation format for function def doc

• Fixed typos in pyproject.toml

0.0.4 (2020-05-30)

• Fixed code to be compatible with python 3.5

• Fixed travis stuff

• Added decorators to time specific functions for pandas.DataFrame.pipe arguments

0.0.3 (2020-05-27)

• First release on PyPI.