Package to extract information from topic models.
Project description
topicpy
Python package for topic modelling pre and post processing
Modules
This package consists of multiple modules:
- converter: handels gene name conversions
- geneontology: uses GSEA to perform gene ontologies
- gtex: handle GTEx data
- hsbmpy: handle ouput of hierarchical stochastic block model
- hypergeom: perform hypergeometric tests
- lda: Run sklearn LatenDirichletAllocation with some more parameters
- tableanalyser: study distributions of a RNA-Seq data
- TCGA_files: handle TCGA metadata
Documentation
https://topicpy.readthedocs.io/en/latest/
Test
Run unittest with
python test/test.py
License
See LICENSE
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
topicpy-0.1.0.tar.gz
(686.2 kB
view hashes)
Built Distribution
topicpy-0.1.0-py3-none-any.whl
(43.6 kB
view hashes)