Detect and evaluate tandem repeats in genomic sequence data.
TRAL is a highly modularized, flexible sequence tandem repeats annotation Python2/3 library.
The source code is documented on GitHub IO.
$ pip install tral
See also more extensive Installation instructions.
Some of TRAL’s functions depend on external software (Installation instructions for dependencies). This includes creation of sequence profile hidden Markov models, alignment of tandem repeat units, and de novo repeat detection.