tree-aid 0.0.3

ETL tools for Tree Aid

Readme

Tree Aid Utilities

Simply call:

''' python3 -m tree_aid.placettes '''

In the directory with the tree and plot data (.json), will output a CSV with processed data.

Alternativly, use in a script / jupyter notebook..

''' from tree_aid.placettes import add_data_to_df, get_clean_tree_df, get_dictionary_from_json #from tree_aid.placettes import add_data_to_df, get_clean_tree_df, get_dictionary_from_json %load_ext autoreload %autoreload 2

config = { 'name_scientific': 'name_scientific', 'small_trees': 'small_circle/repeat_small_tree_circle', 'large_trees': 'group_large_tree/repeat_large_tree', 'geolocation': '_geolocation', 'large_tree_stems' : 'group_large_tree/repeat_large_tree/grp_tree_stand_shoots/repeat_circumference_stem', 'large_tree_circumfrence': 'group_large_tree/repeat_large_tree/grp_tree_stand_shoots/repeat_circumference_stem/grp_circumference_stem/circumference_measure' }

tree_data_loc = './test/Mali_PMP_TREE_Survey_FINAL-2021-10-11-15-15-46.json' plot_data_loc = './test/Mali_PMP_PLOT_Survey_FINAL-2021-10-11-15-16-08.json' output_data_loc = './output.csv'

tree_data = get_dictionary_from_json(tree_data_loc) plot_data = get_dictionary_from_json(plot_data_loc)

tree_plot_df = get_clean_tree_df(tree_data,plot_data, config) output_df = add_data_to_df(tree_plot_df, config) #output_df.to_csv(output_data_loc) '''