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A Python package for calculating tissue-specificity metrics for gene expression.

Project description

tspex

tspex is a Python package for calculating tissue-specificity metrics from gene expression data.

tspex features include:

  • An easy-to-use object-oriented interface.
  • Twelve different tissue-specificity metrics.
  • A plotting function.
  • Support for Jupyter notebooks.

Installation

# Using pip
$ pip install tspex

# using conda
$ conda install -c bioconda tspex

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