Skip to main content

TVB REST client

The tvb-rest-client is a helper package built with the intention to simplify a Python client interaction with TVB REST Server. All the logic necessary to prepare and send requests towards the REST server, is embedded under this client API.

GET requests are sent from this python client using the requests library.

For the POST requests, a client has to attach a file with some input configuration. Such a file is usually an H5 in TVB specific format. Thus, tvb-rest-client has all the logic for preparing those H5 files and sending requests. Also, the REST server uses a Keycloak client at log in time, so this client will open a browser that allows the user to log in, before attempting to make the requests.

Usage

You should have a TVB REST server running, or access to a public one. Then into tvb-rest-client you need to provide the URL towards this TVB REST server. For the following example, we will suppose TVB REST server runs on http://localhost:9090

To launch a TVB REST server locally, you should download tvb-framework version >2.0. and launch it:

$ python -m tvb.interfaces.web.run WEB_PROFILE  # Launch TVB web and REST servers locally

Accessing the client API entry-point

If the TVB REST server you want to access runs at another address, change the parameter in the bellow TVBClient instantiation.

from tvb.interfaces.rest.client.tvb_client import TVBClient
tvb_client = TVBClient("http://localhost:9090")

Attempt to login and start using the client API to send requests, by calling different types of methods:

  • methods that return a list of DTOs

tvb_client.browser_login()
list_of_user_projects = tvb_client.get_project_list()
list_of_datatypes_in_project = tvb_client.get_data_in_project(list_of_user_projects[0].gid)
list_of_operations_for_datatype = tvb_client.get_operations_for_datatype(list_of_datatypes_in_project[0].gid)
  • method that download data files locally, under a folder chosen by the client

datatype_path = tvb_client.retrieve_datatype(list_of_datatypes_in_project[0].gid, download_folder)
  • method that loads in memory the datatype downloaded previously

datatype = tvb_client.load_datatype_from_file(datatype_path)
  • methods that launch operations in the TVB server

    Such an operation requires the client to prepare the operation configuration and send it in an H5 file together with the requests.

    By using the client API, the user only needs to instantiate the proper Model class and send it as argument to the following method. It wraps the serialization of the Model inside the H5 and the attaching to the POST request.

    The example above launches a Fourier analyzer, we suppose the Fourier AlgorithmDTO is list_of_operations_for_datatype[0].

from tvb.adapters.analyzers.fourier_adapter import FFTAdapterModel, FourierAdapter

project_gid = list_of_user_projects[0].gid
model = FFTAdapterModel()
# logic to fill the model with required attributes
operation_gid = tvb_client.launch_operation(project_gid, FourierAdapter, model)
  • method to monitor the status of an operation

monitor_operation(tvb_client, operation_gid)

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

tvb-rest-client-2.0.7.tar.gz (392.4 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

tvb_rest_client-2.0.7-py3-none-any.whl (774.9 kB view details)

Uploaded Python 3

File details

Details for the file tvb-rest-client-2.0.7.tar.gz.

File metadata

  • Download URL: tvb-rest-client-2.0.7.tar.gz
  • Upload date:
  • Size: 392.4 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.2.0.post20200712 requests-toolbelt/0.9.1 tqdm/4.47.0 CPython/3.8.3

File hashes

Hashes for tvb-rest-client-2.0.7.tar.gz
Algorithm Hash digest
SHA256 b4aaa0ebb6c2475c6310407a255e5a535432898431371465e0e7c20b22b94c44
MD5 c17f894273917bbf444bfae64037ccd7
BLAKE2b-256 96ea5e8650d05da3ad2090a8aad204716f926f463270555430e8e906cc6b2e43

See more details on using hashes here.

File details

Details for the file tvb_rest_client-2.0.7-py3-none-any.whl.

File metadata

  • Download URL: tvb_rest_client-2.0.7-py3-none-any.whl
  • Upload date:
  • Size: 774.9 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.2.0.post20200712 requests-toolbelt/0.9.1 tqdm/4.47.0 CPython/3.8.3

File hashes

Hashes for tvb_rest_client-2.0.7-py3-none-any.whl
Algorithm Hash digest
SHA256 e2413f83f39d1422223a400763e6ae850ffc1fac9d6fd847ce6d8a427d445629
MD5 b0c155c2b081875eeabc9c3597513212
BLAKE2b-256 6eaf31ea954ab2a225f19bfe92abd07c43c46697f7a97cb5c33376b37a6981d4

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page