ubkg-api 1.4.0

A REST API in front of the Unified Biomedical Knowlegde Graph

Unified Biomedical Knowledge Graph

UBKG-API

The components of the UBKG include:

• The source framework that extracts ontology information from the UMLS to create a set of CSV files (UMLS CSVs)
• The generation framework that appends to the UMLS CSVs assertion data from other ontologies to create a set of ontology CSVs.
• A neo4j ontology knowledge graph populated from the ontology CSVS.
• An API server that provides RESTful endpoints to query the ontology knowledge graph.

This repository contains the source for the API.

SmartAPI documentation

The specification for the UBKG API can be found here.

Developer Information

Build and publish to PyPI

python -m build
python3 -m twine upload dist/*

Requirements

Python 3.9 or newer