A little package for running mapping requests through UniProt's online API.
Project description
#uniprotmapper
A little package for running mapping requests through UniProt's online
API.
##installation
Download the .zip to your favorite directory on your local machine, `cd`
there and run the command:
```
$ python setup.py install
```
Alternatively, one can:
```
$ pip install uniprotmapper
```
##example
Here is an example:
```python
import uniprotmapper as um
mymapper = um.Mapper()
mymapper.params.update({"to":"WORMBASE_ID",
"from":"ID",
"organism":"6239",
"format":"tab"})
myquery = {"query":["some gene", "some gene", "some gene", "some gene"]}
response = mymapper.get_data(myquery)
#alternatively
mymapper.params.update(myquery)
response = mymapper.get_data()
```
Have fun! :D
A little package for running mapping requests through UniProt's online
API.
##installation
Download the .zip to your favorite directory on your local machine, `cd`
there and run the command:
```
$ python setup.py install
```
Alternatively, one can:
```
$ pip install uniprotmapper
```
##example
Here is an example:
```python
import uniprotmapper as um
mymapper = um.Mapper()
mymapper.params.update({"to":"WORMBASE_ID",
"from":"ID",
"organism":"6239",
"format":"tab"})
myquery = {"query":["some gene", "some gene", "some gene", "some gene"]}
response = mymapper.get_data(myquery)
#alternatively
mymapper.params.update(myquery)
response = mymapper.get_data()
```
Have fun! :D
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