A tool for short uORF annotation.
Project description
Description
uorf4u is a simple bioinformatics tool for retrieving protein's homologous, corresponding genes upstream sequences and annotation conserved short upstream ORFs.
Programming languages: Python3
OS: MacOS, Linux;
Python dependencies: biopython, configs, argparse, statistics, logomaker, matplotlib, pandas;
R dependencies: ggmsa, ggplot2, optparse;
OS-level dependencies: muscle;
License: WTFPL;
Version: 0.1.5 (July 2022)
Detailed documentation available at home page
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