Tools to segment doppler ultrasound signals from scan images.
Project description
Doppler Segmetnations
These codes make up the framework for segmenting the doppler ultrasound scans.
Table of Contents
Installation
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Functions
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Initial_segmentation
Preform an initial corse segmentation of the waveform.
Define_end_ROIs
Function to define regions adjacent to the corse waveform.
Segment_refinement
Function to refine the waveform segmentation within the bounds of the corse waveform ROI.
Search_for_ticks
Function to search for any potential ticks in either of the axes ROIs, also crops the ROI for each axes to avoid the ticks, which can interfere with tesseract text detection in the next function.
Search_for_labels
Function that searches for labels withing the axes ROI.
Plot_Digitized_data
Digitized the ticks and labels to plot waveform.
Plot_correction
If avaliable, corrects the x-axis from arbitrary time units to seconds based on extracted heart rate.
Annotate
Function for visualising the segmentation steps by annotating the original image with the segmenented wavefore, ticks and labels identified from the previous functions.
Contributing
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License
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