utracto 0.0.5

Implementation of UTracto

U-fiber tractography

Welcome to the UTracto's Github repository!

Description

This repository contains a package facilitating the tracking of sub-cortical U-Fibers. The main function of this package is the creation of angular maps, enabling a tractography with a position-dependent maximum angle between tractography steps. The function creating these angular maps is wmfod_to_angle in the core.py file.

This angular map is to be used with a forked version of DIPY.

Installing & importing

Local install

If you want to download the latest version directly from GitHub, you can clone this repository

git clone https://github.com/DelinteNicolas/UTracto.git

Example data and code

An example use of the main methods and outputs of UTracto is written in the example.py file.