Skip to main content

Wrapper for querying VirtualFlyBrain servers.

Project description

VFB_connect Build Status

VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json.

Available on PyPi:

pip install vfb_connect

Some examples:

from vfb_connect.cross_server_tools import VfbConnect

# VFB connect object wraps connections and queries to public VFB servers.

vc=VfbConnect()

# Get TermInfo for Types/Classes, DataSets and anatomical individuals.

vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686'])

vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013'])

vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001'])

# Get all terms relevant to a brain region (all parts and all overlapping cells.  Query by label supported by default.

vc.get_terms_by_region('fan-shaped body')

TermInfo return values conform to VFB_json_schema

For more examples see our Quick Guide Jupyter Notebook

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

vfb_connect-0.0.3.tar.gz (12.4 kB view details)

Uploaded Source

File details

Details for the file vfb_connect-0.0.3.tar.gz.

File metadata

  • Download URL: vfb_connect-0.0.3.tar.gz
  • Upload date:
  • Size: 12.4 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.0 requests/2.24.0 setuptools/49.2.0 requests-toolbelt/0.9.1 tqdm/4.50.2 CPython/3.8.5

File hashes

Hashes for vfb_connect-0.0.3.tar.gz
Algorithm Hash digest
SHA256 e4cd0d6c8eea51681124c1e12d83a95d629246e4a85bf2914a70ca201556f337
MD5 72b83368a97dfd777b03b89a981f40bf
BLAKE2b-256 daf47f35db73b3853a78a871b764bc14601b1c5c2f7cebc73e4c2e44eff5bde3

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page