VFB_connect Build Status

VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json.

Available on PyPi:

pip install vfb_connect

Some examples:

from vfb_connect.cross_server_tools import VfbConnect

# VFB connect object wraps connections and queries to public VFB servers.

vc=VfbConnect()

# Get TermInfo for Types/Classes, DataSets and anatomical individuals.

vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686'])

vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013'])

vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001'])

# Get all terms relevant to a brain region (all parts and all overlapping cells.  Query by label supported by default.

vc.get_terms_by_region('fan-shaped body')

TermInfo return values conform to VFB_json_schema

For more examples see our Quick Guide Jupyter Notebook

Project links

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Newer release available (2.4.5)

Owner

PyPI data
Data sourced directly from PyPI's database.

Credits

Author: David Osumi-Sutherland

License

GNU General Public License v3 (GPLv3)

Classifiers

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2.4.5

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