Wrapper for querying VirtualFlyBrain knowledge graph.
Project description
VFBquery
to setup requirements:
pip install --upgrade vfbquery
To get term info for a term: get_term_info(ID)
e.g.
import vfbquery as vfb
Class example:
vfb.get_term_info('FBbt_00003748')
{'meta': {'Name': '[medulla](FBbt_00003748)',
'SuperTypes': ['Entity',
'Adult',
'Anatomy',
'Class',
'Nervous_system',
'Synaptic_neuropil',
'Synaptic_neuropil_domain',
'Visual_system'],
'Tags': ['Adult',
'Nervous_system',
'Synaptic_neuropil_domain',
'Visual_system'],
'Description': 'The second optic neuropil, sandwiched between the lamina and the lobula complex. It is divided into 10 layers: 1-6 make up the outer (distal) medulla, the seventh (or serpentine) layer exhibits a distinct architecture and layers 8-10 make up the inner (proximal) medulla (Ito et al., 2014).',
'Comment': ''},
'Examples': {'VFB_00030786': [{'id': 'VFB_00030810',
'label': 'medulla on adult brain template Ito2014',
'thumbnail': 'https://www.virtualflybrain.org/data/VFB/i/0003/0810/thumbnail.png',
'thumbnail_transparent': 'https://www.virtualflybrain.org/data/VFB/i/0003/0810/thumbnailT.png',
'nrrd': 'https://www.virtualflybrain.org/data/VFB/i/0003/0810/volume.nrrd',
'obj': 'https://www.virtualflybrain.org/data/VFB/i/0003/0810/volume_man.obj',
'wlz': 'https://www.virtualflybrain.org/data/VFB/i/0003/0810/volume.wlz'}],
'VFB_00101567': [{'id': 'VFB_00102107',
'label': 'ME on JRC2018Unisex adult brain',
'thumbnail': 'https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnail.png',
'thumbnail_transparent': 'https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnailT.png',
'nrrd': 'https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume.nrrd',
'obj': 'https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume_man.obj',
'wlz': 'https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume.wlz'}],
'VFB_00017894': [{'id': 'VFB_00030624',
'label': 'medulla on adult brain template JFRC2',
'thumbnail': 'https://www.virtualflybrain.org/data/VFB/i/0003/0624/thumbnail.png',
'thumbnail_transparent': 'https://www.virtualflybrain.org/data/VFB/i/0003/0624/thumbnailT.png',
'nrrd': 'https://www.virtualflybrain.org/data/VFB/i/0003/0624/volume.nrrd',
'obj': 'https://www.virtualflybrain.org/data/VFB/i/0003/0624/volume_man.obj',
'wlz': 'https://www.virtualflybrain.org/data/VFB/i/0003/0624/volume.wlz'}],
'VFB_00101384': [{'id': 'VFB_00101385',
'label': 'ME(R) on JRC_FlyEM_Hemibrain',
'thumbnail': 'https://www.virtualflybrain.org/data/VFB/i/0010/1385/VFB_00101384/thumbnail.png',
'thumbnail_transparent': 'https://www.virtualflybrain.org/data/VFB/i/0010/1385/VFB_00101384/thumbnailT.png',
'nrrd': 'https://www.virtualflybrain.org/data/VFB/i/0010/1385/VFB_00101384/volume.nrrd',
'obj': 'https://www.virtualflybrain.org/data/VFB/i/0010/1385/VFB_00101384/volume_man.obj',
'wlz': 'https://www.virtualflybrain.org/data/VFB/i/0010/1385/VFB_00101384/volume.wlz'}]},
'Queries': [{'query': 'ListAllAvailableImages',
'ME(R) on JRC_FlyEM_Hemibrain': 'List all available images of medulla',
'function': 'get_instances',
'takes': [{'short_form': {'&&': ['Class', 'Anatomy']},
'default': 'FBbt_00003748'}]}]}
Individual example:
vfb.get_term_info('VFB_00000001')
{'meta': {'Name': '[fru-M-200266](VFB_00000001)',
'SuperTypes': ['Entity',
'Adult',
'Anatomy',
'Cell',
'Expression_pattern_fragment',
'Individual',
'Nervous_system',
'Neuron',
'VFB',
'has_image',
'FlyCircuit',
'NBLAST'],
'Tags': ['Adult', 'Expression_pattern_fragment', 'Nervous_system', 'Neuron'],
'Description': '',
'Comment': 'OutAge: Adult 5~15 days'},
'Thumbnails': {'VFB_00101567': [{'id': 'VFB_00000001',
'label': 'fru-M-200266',
'thumbnail': 'https://virtualflybrain.org/reports/VFB_00000001/thumbnail.png',
'thumbnail_transparent': 'https://virtualflybrain.org/reports/VFB_00000001/thumbnailT.png',
'nrrd': 'https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00101567/volume.nrrd',
'obj': 'https://virtualflybrain.org/reports/VFB_00000001/volume.obj',
'wlz': 'https://virtualflybrain.org/reports/VFB_00000001/volume.wlz',
'swc': 'https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00101567/volume.swc'}],
'VFB_00017894': [{'id': 'VFB_00000001',
'label': 'fru-M-200266',
'thumbnail': 'https://virtualflybrain.org/reports/VFB_00000001/thumbnail.png',
'thumbnail_transparent': 'https://virtualflybrain.org/reports/VFB_00000001/thumbnailT.png',
'nrrd': 'https://www.virtualflybrain.org/data/VFB/i/0000/0001/volume.nrrd',
'obj': 'https://virtualflybrain.org/reports/VFB_00000001/volume.obj',
'wlz': 'https://virtualflybrain.org/reports/VFB_00000001/volume.wlz',
'swc': 'https://www.virtualflybrain.org/data/VFB/i/0000/0001/volume.swc'}]},
'Queries': []}
Template example:
vfb.get_term_info('VFB_00101567')
{
"Name":"JRC2018Unisex",
"IsIndividual":true,
"Domains":{
"6":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2110/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003885",
"index":6,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2110/VFB_00101567/thumbnail.png",
"type_label":"lobula plate",
"id":"VFB_00102110",
"label":"LOP on JRC2018Unisex adult brain",
"center":"None"
},
"22":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2140/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003681",
"index":22,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2140/VFB_00101567/thumbnail.png",
"type_label":"adult lateral accessory lobe",
"id":"VFB_00102140",
"label":"LAL on JRC2018Unisex adult brain",
"center":"None"
},
"28":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2159/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00007053",
"index":28,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2159/VFB_00101567/thumbnail.png",
"type_label":"adult lateral horn",
"id":"VFB_00102159",
"label":"LH on JRC2018Unisex adult brain",
"center":"None"
},
"10":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2118/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00007453",
"index":10,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2118/VFB_00101567/thumbnail.png",
"type_label":"pedunculus of adult mushroom body",
"id":"VFB_00102118",
"label":"PED on JRC2018Unisex adult brain",
"center":"None"
},
"34":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2175/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040038",
"index":34,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2175/VFB_00101567/thumbnail.png",
"type_label":"rubus",
"id":"VFB_00102175",
"label":"RUB on JRC2018Unisex adult brain",
"center":"None"
},
"23":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2141/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00007059",
"index":23,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2141/VFB_00101567/thumbnail.png",
"type_label":"anterior optic tubercle",
"id":"VFB_00102141",
"label":"AOTU on JRC2018Unisex adult brain",
"center":"None"
},
"39":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2201/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00007401",
"index":39,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2201/VFB_00101567/thumbnail.png",
"type_label":"adult antennal lobe",
"id":"VFB_00102201",
"label":"AL on JRC2018Unisex adult brain",
"center":"None"
},
"46":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2273/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003982",
"index":46,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2273/VFB_00101567/thumbnail.png",
"type_label":"antennal mechanosensory and motor center",
"id":"VFB_00102273",
"label":"AMMC on JRC2018Unisex adult brain",
"center":"None"
},
"26":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2152/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040044",
"index":26,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2152/VFB_00101567/thumbnail.png",
"type_label":"posterior lateral protocerebrum",
"id":"VFB_00102152",
"label":"PLP on JRC2018Unisex adult brain",
"center":"None"
},
"37":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2185/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040050",
"index":37,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2185/VFB_00101567/thumbnail.png",
"type_label":"inferior bridge",
"id":"VFB_00102185",
"label":"IB on JRC2018Unisex adult brain",
"center":"None"
},
"59":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2281/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040060",
"index":59,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2281/VFB_00101567/thumbnail.png",
"type_label":"gall",
"id":"VFB_00102281",
"label":"GA on JRC2018Unisex adult brain",
"center":"None"
},
"7":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2114/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00007385",
"index":7,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2114/VFB_00101567/thumbnail.png",
"type_label":"calyx of adult mushroom body",
"id":"VFB_00102114",
"label":"CA on JRC2018Unisex adult brain",
"center":"None"
},
"40":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2212/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040041",
"index":40,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2212/VFB_00101567/thumbnail.png",
"type_label":"vest",
"id":"VFB_00102212",
"label":"VES on JRC2018Unisex adult brain",
"center":"None"
},
"49":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2276/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040051",
"index":49,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2276/VFB_00101567/thumbnail.png",
"type_label":"prow",
"id":"VFB_00102276",
"label":"PRW on JRC2018Unisex adult brain",
"center":"None"
},
"16":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2134/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003679",
"index":16,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2134/VFB_00101567/thumbnail.png",
"type_label":"fan-shaped body",
"id":"VFB_00102134",
"label":"FB on JRC2018Unisex adult brain",
"center":"None"
},
"94":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2282/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003680",
"index":94,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2282/VFB_00101567/thumbnail.png",
"type_label":"nodulus",
"id":"VFB_00102282",
"label":"NO on JRC2018Unisex adult brain",
"center":"None"
},
"44":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2218/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045046",
"index":44,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2218/VFB_00101567/thumbnail.png",
"type_label":"inferior posterior slope",
"id":"VFB_00102218",
"label":"IPS on JRC2018Unisex adult brain",
"center":"None"
},
"32":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2171/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045037",
"index":32,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2171/VFB_00101567/thumbnail.png",
"type_label":"adult crepine",
"id":"VFB_00102171",
"label":"CRE on JRC2018Unisex adult brain",
"center":"None"
},
"35":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2176/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040048",
"index":35,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2176/VFB_00101567/thumbnail.png",
"type_label":"superior clamp",
"id":"VFB_00102176",
"label":"SCL on JRC2018Unisex adult brain",
"center":"None"
},
"42":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2214/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040039",
"index":42,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2214/VFB_00101567/thumbnail.png",
"type_label":"gorget",
"id":"VFB_00102214",
"label":"GOR on JRC2018Unisex adult brain",
"center":"None"
},
"21":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2139/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003682",
"index":21,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2139/VFB_00101567/thumbnail.png",
"type_label":"bulb",
"id":"VFB_00102139",
"label":"BU on JRC2018Unisex adult brain",
"center":"None"
},
"19":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2137/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003668",
"index":19,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2137/VFB_00101567/thumbnail.png",
"type_label":"protocerebral bridge",
"id":"VFB_00102137",
"label":"PB on JRC2018Unisex adult brain",
"center":"None"
},
"38":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2190/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045039",
"index":38,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2190/VFB_00101567/thumbnail.png",
"type_label":"antler",
"id":"VFB_00102190",
"label":"ATL on JRC2018Unisex adult brain",
"center":"None"
},
"14":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2124/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00013694",
"index":14,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2124/VFB_00101567/thumbnail.png",
"type_label":"adult mushroom body beta'-lobe",
"id":"VFB_00102124",
"label":"b\\'L on JRC2018Unisex adult brain",
"center":"None"
},
"11":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2119/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00110657",
"index":11,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2119/VFB_00101567/thumbnail.png",
"type_label":"adult mushroom body alpha-lobe",
"id":"VFB_00102119",
"label":"aL on JRC2018Unisex adult brain",
"center":"None"
},
"30":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2164/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045032",
"index":30,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2164/VFB_00101567/thumbnail.png",
"type_label":"superior intermediate protocerebrum",
"id":"VFB_00102164",
"label":"SIP on JRC2018Unisex adult brain",
"center":"None"
},
"36":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2179/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040049",
"index":36,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2179/VFB_00101567/thumbnail.png",
"type_label":"inferior clamp",
"id":"VFB_00102179",
"label":"ICL on JRC2018Unisex adult brain",
"center":"None"
},
"3":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003748",
"index":3,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnail.png",
"type_label":"medulla",
"id":"VFB_00102107",
"label":"ME on JRC2018Unisex adult brain",
"center":"None"
},
"15":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2133/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00013695",
"index":15,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2133/VFB_00101567/thumbnail.png",
"type_label":"adult mushroom body gamma-lobe",
"id":"VFB_00102133",
"label":"gL on JRC2018Unisex adult brain",
"center":"None"
},
"5":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2109/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003852",
"index":5,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2109/VFB_00101567/thumbnail.png",
"type_label":"lobula",
"id":"VFB_00102109",
"label":"LO on JRC2018Unisex adult brain",
"center":"None"
},
"18":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2135/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003678",
"index":18,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2135/VFB_00101567/thumbnail.png",
"type_label":"ellipsoid body",
"id":"VFB_00102135",
"label":"EB on JRC2018Unisex adult brain",
"center":"None"
},
"33":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2174/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00048509",
"index":33,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2174/VFB_00101567/thumbnail.png",
"type_label":"adult round body",
"id":"VFB_00102174",
"label":"ROB on JRC2018Unisex adult brain",
"center":"None"
},
"50":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2280/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00014013",
"index":50,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2280/VFB_00101567/thumbnail.png",
"type_label":"adult gnathal ganglion",
"id":"VFB_00102280",
"label":"GNG on JRC2018Unisex adult brain",
"center":"None"
},
"13":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2123/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00110658",
"index":13,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2123/VFB_00101567/thumbnail.png",
"type_label":"adult mushroom body beta-lobe",
"id":"VFB_00102123",
"label":"bL on JRC2018Unisex adult brain",
"center":"None"
},
"47":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2274/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045050",
"index":47,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2274/VFB_00101567/thumbnail.png",
"type_label":"flange",
"id":"VFB_00102274",
"label":"FLA on JRC2018Unisex adult brain",
"center":"None"
},
"29":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2162/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00007054",
"index":29,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2162/VFB_00101567/thumbnail.png",
"type_label":"superior lateral protocerebrum",
"id":"VFB_00102162",
"label":"SLP on JRC2018Unisex adult brain",
"center":"None"
},
"48":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2275/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045051",
"index":48,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2275/VFB_00101567/thumbnail.png",
"type_label":"cantle",
"id":"VFB_00102275",
"label":"CAN on JRC2018Unisex adult brain",
"center":"None"
},
"4":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2108/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045003",
"index":4,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2108/VFB_00101567/thumbnail.png",
"type_label":"accessory medulla",
"id":"VFB_00102108",
"label":"AME on JRC2018Unisex adult brain",
"center":"None"
},
"12":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2121/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00013691",
"index":12,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2121/VFB_00101567/thumbnail.png",
"type_label":"adult mushroom body alpha'-lobe",
"id":"VFB_00102121",
"label":"a\\'L on JRC2018Unisex adult brain",
"center":"None"
},
"25":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2148/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040042",
"index":25,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2148/VFB_00101567/thumbnail.png",
"type_label":"posterior ventrolateral protocerebrum",
"id":"VFB_00102148",
"label":"PVLP on JRC2018Unisex adult brain",
"center":"None"
},
"45":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2271/VFB_00101567/thumbnailT.png",
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"type_label":"saddle",
"id":"VFB_00102271",
"label":"SAD on JRC2018Unisex adult brain",
"center":"None"
},
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"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2170/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00007055",
"index":31,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2170/VFB_00101567/thumbnail.png",
"type_label":"superior medial protocerebrum",
"id":"VFB_00102170",
"label":"SMP on JRC2018Unisex adult brain",
"center":"None"
},
"41":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2213/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040040",
"index":41,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2213/VFB_00101567/thumbnail.png",
"type_label":"epaulette",
"id":"VFB_00102213",
"label":"EPA on JRC2018Unisex adult brain",
"center":"None"
},
"43":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2215/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045040",
"index":43,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2215/VFB_00101567/thumbnail.png",
"type_label":"superior posterior slope",
"id":"VFB_00102215",
"label":"SPS on JRC2018Unisex adult brain",
"center":"None"
},
"27":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2154/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00045027",
"index":27,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2154/VFB_00101567/thumbnail.png",
"type_label":"wedge",
"id":"VFB_00102154",
"label":"WED on JRC2018Unisex adult brain",
"center":"None"
},
"24":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/2146/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00040043",
"index":24,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/2146/VFB_00101567/thumbnail.png",
"type_label":"anterior ventrolateral protocerebrum",
"id":"VFB_00102146",
"label":"AVLP on JRC2018Unisex adult brain",
"center":"None"
},
"0":{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/thumbnailT.png",
"type_id":"FBbt_00003624",
"index":0,
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/thumbnail.png",
"type_label":"adult brain",
"id":"VFB_00101567",
"label":"JRC2018Unisex",
"center":"None"
}
},
"IsTemplate":true,
"Tags":[
"Adult",
"Nervous_system"
],
"Images":{
"VFBc_00101567":[
{
"thumbnail_transparent":"https://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/thumbnailT.png",
"wlz":"https://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/volume.wlz",
"voxel":{
"X":0.5189161,
"Y":0.5189161,
"Z":1.0
},
"nrrd":"https://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/volume.nrrd",
"extent":{
"X":1211,
"Y":567,
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},
"thumbnail":"https://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/thumbnail.png",
"orientation":"",
"obj":"https://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/volume_man.obj",
"id":"VFBc_00101567",
"label":"JRC2018Unisex_c",
"center":{
"X":605,
"Y":283,
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}
}
]
},
"SuperTypes":[
"Entity",
"Adult",
"Anatomy",
"Individual",
"Nervous_system",
"Template",
"has_image"
],
"Meta":{
"Name":"[JRC2018Unisex](VFB_00101567)",
"Description":"Janelia 2018 unisex, averaged adult brain template",
"Comment":""
},
"Queries":[
],
"IsClass":false,
"Id":"VFB_00101567"
}
Queries:
vfb.get_instances('FBbt_00003686')
{'headers': {'label': {'title': 'Name',
'type': 'markdown',
'order': 0,
'sort': {0: 'Asc'}},
'parent': {'title': 'Parent Type', 'type': 'markdown', 'order': 1},
'template': {'title': 'Template', 'type': 'string', 'order': 4},
'tags': {'title': 'Gross Types', 'type': 'tags', 'order': 3}},
'rows': [{'label': '[KC (L1EM:16438190)](VFB_00100462)',
'parent': '[Kenyon cell](FBbt_00003686)',
'template': 'L1 larval CNS ssTEM - Cardona/Janelia',
'tags': ['Entity',
'Anatomy',
'Cell',
'Individual',
'Nervous_system',
'Neuron',
'has_image',
'has_neuron_connectivity',
'L1EM',
'NBLAST']},
{'label': '[KC (L1EM:16627950)](VFB_00100485)',
'parent': '[Kenyon cell](FBbt_00003686)',
'template': 'L1 larval CNS ssTEM - Cardona/Janelia',
'tags': ['Entity',
'Anatomy',
'Cell',
'Individual',
'Nervous_system',
'Neuron',
'has_image',
'has_neuron_connectivity',
'L1EM',
'NBLAST']},
...
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