visbrain 0.3.9

Hardware-accelerated visualization suite for brain-data in Python

Visbrain

Visbrain is an open-source python 3 package dedicated to brain signals visualization. It is based on top of VisPy and PyQt and is distributed under the 3-Clause BSD license. We also provide an on line documentation, examples and datasets and can also be downloaded from PyPi.

Important links

• Official source code repository : https://github.com/EtienneCmb/visbrain
• Online documentation : http://visbrain.org
• Visbrain chat room

Installation

Dependencies

Visbrain requires :

• NumPy >= 1.13
• SciPy
• VisPy >= 0.5.0
• Matplotlib >= 1.5.5
• PyQt5
• Pillow

User installation

Install Visbrain :

pip install visbrain

We also strongly recommend to install pandas and pyopengl :

pip install pandas PyOpenGL PyOpenGL_accelerate

Modules

• Brain : visualize EEG/MEG/Intracranial data, connectivity in a standard MNI 3D brain (see Brain examples).
• Sleep : visualize and analyze polysomnographic sleep data (see Sleep examples).
• Signal : data-mining module for time-series inspection (see Signal examples).
• Topo : display topographical maps (see Topo examples).
• Figure : figure-layout for high-quality publication-like figures (see Figure examples).
• Colorbar : colorbar editor (see Colorbar examples).

Contribution

Main developers

• Etienne Combrisson
• Raphael Vallat

With the help of

Karim Jerbi, Christian O’Reilly, David Meunier, Dmitri Altukchov, Tarek Lajnef, Perrine Ruby, JB Einchenlaub, kevroy314, Annalisa Pascarella, Thomas Thiery, Yann Harel, Anne-Lise Saive, Golnush Alamian