Hardware-accelerated visualization suite for brain-data in Python
Project description
Visbrain
Visbrain is an open-source python 3 package dedicated to brain signals visualization. It is based on top of VisPy and PyQt and is distributed under the 3-Clause BSD license. We also provide an on line documentation, examples and datasets and can also be downloaded from PyPi.
Important links
- Official source code repository : https://github.com/EtienneCmb/visbrain
- Online documentation : http://visbrain.org
- Visbrain chat room
Installation
Dependencies
Visbrain requires :
- NumPy >= 1.13
- SciPy
- VisPy >= 0.5.0
- Matplotlib >= 1.5.5
- PyQt5
- Pillow
User installation
Install Visbrain :
pip install visbrain
We also strongly recommend to install pandas and pyopengl :
pip install pandas PyOpenGL PyOpenGL_accelerate
Modules
- Brain : visualize EEG/MEG/Intracranial data, connectivity in a standard MNI 3D brain (see Brain examples).
- Sleep : visualize and analyze polysomnographic sleep data (see Sleep examples).
- Signal : data-mining module for time-series inspection (see Signal examples).
- Topo : display topographical maps (see Topo examples).
- Figure : figure-layout for high-quality publication-like figures (see Figure examples).
- Colorbar : colorbar editor (see Colorbar examples).
Contribution
Main developers
With the help of
Karim Jerbi, Christian O’Reilly, David Meunier, Dmitri Altukchov, Tarek Lajnef, Perrine Ruby, JB Einchenlaub, kevroy314, Annalisa Pascarella, Thomas Thiery, Yann Harel, Anne-Lise Saive, Golnush Alamian
Project details
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