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Project description
Vivarium-COBRA
A vivarium wrapper process for the COBRApy library.
COBRA_FBA can be loaded with BiGG models, and has been primarily used with BiGG model iAF1260b.
The project includes CobraComposite, which adds auxiliary processes MassDeriver and VolumeDeriver
to make a type of dynamic FBA. Other processes can constrain individual fluxes in COBRA_FBA through
the flux_bounds port, allowing for a type of integrative FBA.
Installation
$ pip install -r requirements.txt
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