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Project description

Vivarium-core

Vivarium-core provides a process interface and engine for composing multi-scale models in computational biology.

vivarium

Documentation and Tutorials

Visit Vivarium documentation

Concept

A Vivarium is a "place of life" -- an enclosure for raising organisms in controlled environments for observation or research. Typical vivaria include aquariums or terrariums. The vivarium provided in this repository is a computational vivarium for developing multi-scale models of cells in dynamic environments. Its framework is a synthesis of hybrid modeling, agent-based modeling, multi-scale simulation, and modular programming.

Installation

vivarium-core can be used as a python library. To install:

$ pip install vivarium-core

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1.6.4

1.6.3

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This version

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