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vivarium is a microsimulation framework built on top of the standard scientific python stack.

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Vivarium is a simulation framework written using standard scientific Python tools.

Vivarium requires Python 3.8-3.11 to run

You can install vivarium from PyPI with pip:

> pip install vivarium

or build it from source with

> git clone

> cd vivarium

> conda create -n ENVIRONMENT_NAME python=3.11

> pip install -e .[dev]

This will make the vivarium library available to python and install a command-line executable called simulate that you can use to verify your installation with

> simulate test

Check out the docs!

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