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Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch

Project description

vollseg-napari-mtrack

License BSD-3 PyPI Python Version tests codecov napari hub

Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install vollseg-napari-mtrack via pip:

pip install vollseg-napari-mtrack

To install latest development version :

pip install git+https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "vollseg-napari-mtrack" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Project details


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vollseg-napari-mtrack-1.3.2.tar.gz (30.1 kB view details)

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  • Upload date:
  • Size: 26.9 kB
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  • Uploaded using Trusted Publishing? No
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