Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch
Project description
vollseg-napari-mtrack
Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
Installation
You can install vollseg-napari-mtrack via pip:
pip install vollseg-napari-mtrack
To install latest development version :
pip install git+https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "vollseg-napari-mtrack" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file vollseg-napari-mtrack-1.3.3.tar.gz.
File metadata
- Download URL: vollseg-napari-mtrack-1.3.3.tar.gz
- Upload date:
- Size: 30.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.7.1 importlib_metadata/4.10.0 pkginfo/1.8.2 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 8a14ca7da2c2d34179ddf7f0ff2cea4bb26ea53fd90e2b8ba2ff19b615184e11 |
|
| MD5 | 4f1f77a5acd83fbe3e502a5f6c43821e |
|
| BLAKE2b-256 | c0e11a921c3cd174075f8d74f5c605db47f556ee4c1ef4b811ccd7f3c0923ad8 |
File details
Details for the file vollseg_napari_mtrack-1.3.3-py3-none-any.whl.
File metadata
- Download URL: vollseg_napari_mtrack-1.3.3-py3-none-any.whl
- Upload date:
- Size: 26.9 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.7.1 importlib_metadata/4.10.0 pkginfo/1.8.2 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 5c7a09681fd2a65810703f8830e7a0a45a5f03d838756d275b0edf1e6768f9dd |
|
| MD5 | 60d221eadb562a6e1c5d720730281e15 |
|
| BLAKE2b-256 | 6252332c6038f13a53e266fdc744d468c64eb53749275be9ce37b91719ffc4de |
