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Project description
WebGestaltPy
A python package containing bindings to the underlying Rust library webgestalt_rust.
Features
- Compute GSEA and ORA
- Run a meta-analysis combining multiple lists
- Combine multiple lists into a single analysis type
The output of the python package is the values. This does not generate any HTML reports. For reports, please use the R package.
Installation
pip install webgestaltpy
Development
WebGestaltPy uses maturin and rye to build the full project. To build WebGestaltPy, run the following commands
git clone https://github.com/bzhanglab/webgestaltpy.git
cd webgestaltpy
rye sync # download correct python version and install dependencies
rye tools install maturin
rye run python -m ensurepip --default-pip # makes sure maturin can run correctly
rye shell # initialize shell so the python command executes the local version
maturin develop # add -r to build and install the full release version of the rust library.
python test.py # run the test script
Project details
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SHA256 | 165d50c7c58444eb2dd29108f12df75ec860fabdd691a16bd14a0a5f795c880f |
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MD5 | 3ad1423a5110f75741198f3b80b75d9c |
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MD5 | b3d4f4d433e40524a1f2a57c7651c42f |
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MD5 | cb494f090f819771a749d6edec900181 |
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MD5 | c153bfb99405a6683097e326f40929fd |
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MD5 | 9486faa02944a2dcb9c19a12d56c82ca |
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MD5 | 8930ac7c701352e8807501d454eed574 |
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MD5 | 3ebc729f455187788a334be47be2c8ee |
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MD5 | 1879bd6960373d65ff7187662158ccbf |
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MD5 | 06e7981190b442a1ff254420cac71e6c |
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MD5 | 42ffb9aa61357768c2451359bcced60b |
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MD5 | fc6c605179776f647fa0baff4c75a7d1 |
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MD5 | d18ffda6e69fc082de21714925a88faa |
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MD5 | b72584a202685fd33ced7700f45ee9b6 |
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MD5 | bc009c0a62ab1c0ef3d26bf21d13da39 |
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MD5 | 642c246f837a2b57a51c1b62f2fde6a6 |
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MD5 | 28ff90d7ca34f4731556e82ac596f08f |
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MD5 | d77b94a122f320224f53f71307ca8c21 |
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SHA256 | 2e55f09e4e66528468a945934c2153e0c4a48dd2913bbec36fdeeac5499c0651 |
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MD5 | 763a2f6c4b6777956f32c33536bbd510 |
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MD5 | b2aefb8133f965a4f6958d343d9358b9 |
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MD5 | b033172168aaec5c2d82dc5aca2decb4 |
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MD5 | f4f51a0ded2a603344cc7403dce89634 |
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MD5 | 55ae30bdc74a6c09b18084b2c0ceeaa1 |
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MD5 | 958c49938403c32af8ff389bfe18a744 |
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