Work with well plates!
Project description
Well Plate (well_plate)
Makes nice visualizations of well plates!
Installation
pip install well_plate
Dependencies
Options
-
Well numbers
- 6
- 12
- 24
- 96
- 384
- To add more see well_plate/config.py
-
Well shape
- 'circle'
- 'rect' (square)
-
Add data
- use
wp.add_data()
; pass in a pd.Series with the index corresponding to well plate index (eg. "A1", "E4", ...)
- use
Example
Basic example
import well_plate
wp = well_plate.WellPlate(24)
wp.plot()
Change well size
import well_plate
wp = well_plate.WellPlate(96, "rect")
wp.plot()
Add data
import pandas as pd
import well_plate
wp = well_plate.WellPlate(384, "rect")
df = pd.read_csv("example1_data.csv", index_col=0)
wp.add_data(df["mw_n"])
wp.plot(key="mw_n")
wp.heatmap(key="mw_n")
Project details
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