No project description provided

Project description

Lens

manage a colony of distributed whole-cell agents

Usage

Install and start your Zookeeper and Kafka servers per instructions in CovertLab/wcEcoli/agent/README.md.
Start the Shepherd server to manage agent processes:

> lein run
- You can check its status by opening a web browser onto http://localhost:41114/status.
Start the Lens visualization server:

> lein run -m shepherd.lens
Open a web browser onto Lens http://localhost:33332.
- The Run/Pause button controls the simulation clock.
- The pop-up menu picks which molecular concentration field to view. "GLC[p]" and "CARBON-MONOXIDE[p]" are the most interesting.
Create agents per the instructions in CovertLab/wcEcoli/environment/README.md.

License

Distributed under the Eclipse Public License either version 1.0 or (at your option) any later version.

Project details

Release history Release notifications | RSS feed

0.0.28

Nov 6, 2019

0.0.27

Oct 8, 2019

0.0.26

Oct 8, 2019

0.0.25

Oct 7, 2019

0.0.24

Oct 3, 2019

0.0.23

Sep 17, 2019

0.0.22

Sep 17, 2019

0.0.21

Sep 17, 2019

0.0.20

Sep 17, 2019

0.0.19

Sep 17, 2019

0.0.18

Sep 17, 2019

0.0.17

Sep 17, 2019

0.0.16

Sep 16, 2019

0.0.15

Sep 14, 2019

0.0.14

Sep 13, 2019

This version

0.0.13

Sep 13, 2019

0.0.12

Sep 13, 2019

0.0.11

Sep 13, 2019

0.0.10

Sep 12, 2019

0.0.9

Sep 12, 2019

0.0.8

Sep 12, 2019

0.0.7

Sep 12, 2019

0.0.6

Sep 12, 2019

0.0.5

Sep 12, 2019

0.0.4

Sep 11, 2019

0.0.3

Sep 11, 2019

0.0.2

Jul 12, 2019

0.0.1

Jul 12, 2019

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

wholecell-lens-0.0.13.tar.gz (84.0 kB view details)

Uploaded Sep 13, 2019 Source

Built Distribution

wholecell_lens-0.0.13-py2-none-any.whl (6.1 MB view details)

Uploaded Sep 13, 2019 Python 2

File details

Details for the file wholecell-lens-0.0.13.tar.gz.

File metadata

Download URL: wholecell-lens-0.0.13.tar.gz
Upload date: Sep 13, 2019
Size: 84.0 kB
Tags: Source
Uploaded using Trusted Publishing? No
Uploaded via: twine/1.12.1 pkginfo/1.5.0.1 requests/2.21.0 setuptools/41.0.0 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/2.7.15

File hashes

Hashes for wholecell-lens-0.0.13.tar.gz
Algorithm	Hash digest
SHA256	`ff43decd02a6b588a524c411657f3f67e4d5a17ba203b67fc34815868f4dd4b3`
MD5	`75141f62ea942329e3b29407c2841ccc`
BLAKE2b-256	`519a3b0a97b34adc28213480ae5783278856ba4934fa992a39896773685dca67`

See more details on using hashes here.

File details

Details for the file wholecell_lens-0.0.13-py2-none-any.whl.

File metadata

Download URL: wholecell_lens-0.0.13-py2-none-any.whl
Upload date: Sep 13, 2019
Size: 6.1 MB
Tags: Python 2
Uploaded using Trusted Publishing? No
Uploaded via: twine/1.12.1 pkginfo/1.5.0.1 requests/2.21.0 setuptools/41.0.0 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/2.7.15

File hashes

Hashes for wholecell_lens-0.0.13-py2-none-any.whl
Algorithm	Hash digest
SHA256	`b7c3745b084e8ee1de290c55700ccffb8c00538564d387b5e84275c8de67321e`
MD5	`7aaab029d3bfabb5625ad9e0b6d43527`
BLAKE2b-256	`d70abfd68884dd80d5356d7fcc4045a2d7cd531527d9a5d17b951f67afb474cf`