Skip to main content

No project description provided

Project description

Lens

manage a colony of distributed whole-cell agents

Usage

  1. Install and start your Zookeeper and Kafka servers per instructions in CovertLab/wcEcoli/agent/README.md.

  2. Start the Shepherd server to manage agent processes:

    > lein run

  3. Start the Lens visualization server:

    > lein run -m shepherd.lens

  4. Open a web browser onto Lens http://localhost:33332.

    • The Run/Pause button controls the simulation clock.

    • The pop-up menu picks which molecular concentration field to view. "GLC[p]" and "CARBON-MONOXIDE[p]" are the most interesting.

  5. Create agents per the instructions in CovertLab/wcEcoli/environment/README.md.

License

Copyright © 2018 Covert Lab

Distributed under the Eclipse Public License either version 1.0 or (at your option) any later version.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

wholecell-lens-0.0.21.tar.gz (86.2 kB view details)

Uploaded Source

Built Distribution

wholecell_lens-0.0.21-py2-none-any.whl (6.1 MB view details)

Uploaded Python 2

File details

Details for the file wholecell-lens-0.0.21.tar.gz.

File metadata

  • Download URL: wholecell-lens-0.0.21.tar.gz
  • Upload date:
  • Size: 86.2 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.5.0.1 requests/2.21.0 setuptools/41.0.0 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/2.7.15

File hashes

Hashes for wholecell-lens-0.0.21.tar.gz
Algorithm Hash digest
SHA256 48f7248070d2e713b69105e845c34c0b814cdc50161550c3b54c19d0bf1884d7
MD5 3d6be32a7de8c8c8b5623442f29c0e4f
BLAKE2b-256 35fe165325992cec208169bc900195938db8a48661a7fded85c23a6101c823b0

See more details on using hashes here.

File details

Details for the file wholecell_lens-0.0.21-py2-none-any.whl.

File metadata

  • Download URL: wholecell_lens-0.0.21-py2-none-any.whl
  • Upload date:
  • Size: 6.1 MB
  • Tags: Python 2
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.5.0.1 requests/2.21.0 setuptools/41.0.0 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/2.7.15

File hashes

Hashes for wholecell_lens-0.0.21-py2-none-any.whl
Algorithm Hash digest
SHA256 2711b207e527b56720f167cc686c353398285bb1db01f5eb02ae280519550ac5
MD5 f15da1fee3e07d00f4d284e2bc349e8b
BLAKE2b-256 c25333621d25de2ac45ea1c5e892661633e31679f463b005e98a1274a20edd9d

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page