Skip to main content

No project description provided

Project description

Lens

manage a colony of distributed whole-cell agents

Usage

  1. Install and start your Zookeeper and Kafka servers per instructions in CovertLab/wcEcoli/agent/README.md.

  2. Start the Shepherd server to manage agent processes:

    > lein run

  3. Start the Lens visualization server:

    > lein run -m shepherd.lens

  4. Open a web browser onto Lens http://localhost:33332.

    • The Run/Pause button controls the simulation clock.

    • The pop-up menu picks which molecular concentration field to view. "GLC[p]" and "CARBON-MONOXIDE[p]" are the most interesting.

  5. Create agents per the instructions in CovertLab/wcEcoli/environment/README.md.

License

Copyright © 2018 Covert Lab

Distributed under the Eclipse Public License either version 1.0 or (at your option) any later version.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

wholecell-lens-0.0.5.tar.gz (2.8 kB view details)

Uploaded Source

Built Distribution

wholecell_lens-0.0.5-py2-none-any.whl (4.2 kB view details)

Uploaded Python 2

File details

Details for the file wholecell-lens-0.0.5.tar.gz.

File metadata

  • Download URL: wholecell-lens-0.0.5.tar.gz
  • Upload date:
  • Size: 2.8 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.6.2 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/2.7.15

File hashes

Hashes for wholecell-lens-0.0.5.tar.gz
Algorithm Hash digest
SHA256 47a48c82a63361e88554f9c8b1b7e7e13b64b7bffaf57f80daf5c7af2e92f0b8
MD5 d9953ea0eea917c30df60dca1e2e837c
BLAKE2b-256 f8ce10837f2f30adbbe7d37fd871911ed974ab1934ef875f522a08cd4f935555

See more details on using hashes here.

File details

Details for the file wholecell_lens-0.0.5-py2-none-any.whl.

File metadata

  • Download URL: wholecell_lens-0.0.5-py2-none-any.whl
  • Upload date:
  • Size: 4.2 kB
  • Tags: Python 2
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.6.2 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/2.7.15

File hashes

Hashes for wholecell_lens-0.0.5-py2-none-any.whl
Algorithm Hash digest
SHA256 1632142738e1d1cc6309d1ce5d265d6b5623e2fb36cc98e9b30846dca212e5fc
MD5 8132c038b72a13ac186b1dcf115097ff
BLAKE2b-256 288b62c61a8ed99f24f0a8dbb1132a6c239a9cb86faa8b51e5c56b4b5f5a1dc6

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page