whylogs 1.1.9

Profile and monitor your ML data pipeline end-to-end

The open standard for data logging

Documentation • Slack Community • Python Quickstart • WhyLabs Quickstart

What is whylogs

whylogs is an open source library for logging any kind of data. With whylogs, users are able to generate summaries of their datasets (called whylogs profiles) which they can use to:

1. Track changes in their dataset
2. Create data constraints to know whether their data looks the way it should
3. Quickly visualize key summary statistics about their datasets

These three functionalities enable a variety of use cases for data scientists, machine learning engineers, and data engineers:

• Detect data drift in model input features
• Detect training-serving skew, concept drift, and model performance degradation
• Validate data quality in model inputs or in a data pipeline
• Perform exploratory data analysis of massive datasets
• Track data distributions & data quality for ML experiments
• Enable data auditing and governance across the organization
• Standardize data documentation practices across the organization
• And more

whylogs can be run in Python or Apache Spark (both PySpark and Scala) environments on a variety of data types. We integrate with lots of other tools including Pandas, AWS Sagemaker, MLflow, Flask, Ray, RAPIDS, Apache Kafka, and more.

If you have any questions, comments, or just want to hang out with us, please join our Slack Community. In addition to joining the Slack Community, you can also help this project by giving us a ⭐ in the upper right corner of this page.

Python Quickstart

Installing whylogs using the pip package manager is as easy as running pip install whylogs in your terminal.

From here, you can quickly log a dataset:

import whylogs as why
import pandas as pd

#dataframe
df = pd.read_csv("path/to/file.csv")
results = why.log(df)

And voila, you now have a whylogs profile. To learn more about about a whylogs profile is and what you can do with it, read on.

Table of Contents

• whylogs Profiles
• Data Constraints
• Profile Visualization
• Integrations
• Supported Data Types
• Examples
• Usage Statistics
• Community
• Contribute

whylogs Profiles

What are profiles

whylogs profiles are the core of the whylogs library. They capture key statistical properties of data, such as the distribution (far beyond simple mean, median, and standard deviation measures), the number of missing values, and a wide range of configurable custom metrics. By capturing these summary statistics, we are able to accurately represent the data and enable all of the use cases described in the introduction.

whylogs profiles have three properties that make them ideal for data logging: they are efficient, customizable, and mergeable.

Efficient: whylogs profiles efficiently describe the dataset that they represent. This high fidelity representation of datasets is what enables whylogs profiles to be effective snapshots of the data. They are better at capturing the characteristics of a dataset than a sample would be—as discussed in our Data Logging: Sampling versus Profiling blog post—and are very compact.

Customizable: The statistics that whylogs profiles collect are easily configured and customizable. This is useful because different data types and use cases require different metrics, and whylogs users need to be able to easily define custom trackers for those metrics. It’s the customizability of whylogs that enables our text, image, and other complex data trackers.

Mergeable: One of the most powerful features of whylogs profiles is their mergeability. Mergeability means that whylogs profiles can be combined together to form new profiles which represent the aggregate of their constituent profiles. This enables logging for distributed and streaming systems, and allows users to view aggregated data across any time granularity.

How do you generate profiles

Once whylogs is installed, it's easy to generate profiles in both Python and Java environments.

To generate a profile from a Pandas dataframe in Python, simply run:

import whylogs as why
import pandas as pd

#dataframe
df = pd.read_csv("path/to/file.csv")
results = why.log(df)

What can you do with profiles

Once you’ve generated whylogs profiles, a few things can be done with them:

In your local Python environment, you can set data constraints or visualize your profiles. Setting data constraints on your profiles allows you to get notified when your data don’t match your expectations, allowing you to do data unit testing and some baseline data monitoring. With the Profile Visualizer, you can visually explore your data, allowing you to understand it and ensure that your ML models are ready for production.

In addition, you can send whylogs profiles to the SaaS ML monitoring and AI observability platform WhyLabs. With WhyLabs, you can automatically set up monitoring for your machine learning models, getting notified on both data quality and data change issues (such as data drift). If you’re interested in trying out WhyLabs, check out the always free Starter edition, which allows you to experience the entire platform’s capabilities with no credit card required.

WhyLabs

WhyLabs is a managed service offering built for helping users make the most of their whylogs profiles. With WhyLabs, users can ingest profiles and set up automated monitoring as well as gain full observability into their data and ML systems. With WhyLabs, users can ensure the reliability of their data and models, and debug any problems that arise with them.

Ingesting whylogs profiles into WhyLabs is easy. After obtaining your access credentials from the platform, you’ll need to set them in your Python environment, log a dataset, and write it to WhyLabs, like so:

import whylogs as why
import os

os.environ["WHYLABS_DEFAULT_ORG_ID"] = "org-0" # ORG-ID is case-sensitive
os.environ["WHYLABS_API_KEY"] = "YOUR-API-KEY"
os.environ["WHYLABS_DEFAULT_DATASET_ID"] = "model-0" # The selected model project "MODEL-NAME" is "model-0"

results = why.log(df)

results.writer("whylabs").write()

If you’re interested in trying out WhyLabs, check out the always free Starter edition, which allows you to experience the entire platform’s capabilities with no credit card required.

Data Constraints

Constraints are a powerful feature built on top of whylogs profiles that enable you to quickly and easily validate that your data looks the way that it should. There are numerous types of constraints that you can set on your data (that numerical data will always fall within a certain range, that text data will always be in a JSON format, etc) and, if your dataset fails to satisfy a constraint, you can fail your unit tests or your CI/CD pipeline.

A simple example of setting and testing a constraint is:

import whylogs as why
from whylogs.core.constraints import Constraints, ConstraintsBuilder, MetricsSelector, MetricConstraint

profile_view = why.log(df).view()
builder = ConstraintsBuilder(profile_view)

builder.add_constraint(MetricConstraint(
    name="col_name >= 0",
    condition=lambda x: x.min >= 0,
    metric_selector=MetricsSelector(metric_name='distribution', column_name='col_name')
))
constraints: Constraints = builder.build()
constraints.report()

To learn more about constraints, check out: the Constraints Example.

Profile Visualization

In addition to being able to automatically get notified about potential issues in data, it’s also useful to be able to inspect your data manually. With the profile visualizer, you can generate interactive reports about your profiles (either a single profile or comparing profiles against each other) directly in your Jupyter notebook environment. This enables exploratory data analysis, data drift detection, and data observability.

To access the profile visualizer, install the [viz] module of whylogs by running pip install whylogs[viz] in your terminal. One type of profile visualization that we can create is a drift report; here's a simple example of how to analyze the drift between two profiles:

import whylogs as why

from whylogs.viz import NotebookProfileVisualizer

result = why.log(pandas=df_target)
prof_view = result.view()

result_ref = why.log(pandas=df_reference)
prof_view_ref = result_ref.view()

visualization = NotebookProfileVisualizer()
visualization.set_profiles(target_profile_view=prof_view, reference_profile_view=prof_view_ref)

visualization.summary_drift_report()

To learn more about visualizing your profiles, check out: the Visualizer Example

Data Types

whylogs supports both structured and unstructured data, specifically:

Data type	Features	Notebook Example
Tabular Data	✅	Getting started with structured data
Image Data	✅	Getting started with images
Text Data	✅	String Features
Embeddings	🛠
Other Data Types	✋	Do you have a request for a data type that you don’t see listed here? Raise an issue or join our Slack community and make a request! We’re always happy to help

Integrations

Integration	Features	Resources
Spark	Run whylogs in Apache Spark environment	Code Example
Pandas	Log and monitor any pandas dataframe	Notebook Example whylogs: Embrace Data Logging
MLflow	Enhance MLflow metrics with whylogs:	Notebook Example Streamlining data monitoring with whylogs and MLflow
Java	Run whylogs in Java environment	Notebook Example
Docker	Run whylogs as in Docker	Rest Container
AWS S3	Store whylogs profiles in S3	S3 example
Flask	Integrate whylogs with your Flask Application	Code Example
Feast	Log features from your Feature Store with feast and whylogs	Code Example
BigQuery	Profile data queried from a Google BigQuery table	Code Example
WhyLabs	Monitor your profiles continuously with the WhyLabs Observability Platform	Code Example

Examples

For a full set of our examples, please check out the examples folder.

Usage Statistics

Starting with whylogs v1.0.0, whylogs by default collects anonymous information about a user’s environment. These usage statistics do not include any information about the user or the data that they are profiling, only the environment that the user in which the user is running whylogs.

To read more about what usage statistics whylogs collects, check out the relevant documentation.

To turn off Usage Statistics, simply set the WHYLOGS_NO_ANALYTICS environment variable to True, like so:

import os
os.environ['WHYLOGS_NO_ANALYTICS']='True'

Community

If you have any questions, comments, or just want to hang out with us, please join our Slack channel.

Contribute

How to Contribute

We welcome contributions to whylogs. Please see our contribution guide and our development guide for details.

Contributors

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